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PTPN20 protein tyrosine phosphatase non-receptor type 20 [ Homo sapiens (human) ]

Gene ID: 26095, updated on 3-Apr-2024

Summary

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Official Symbol
PTPN20provided by HGNC
Official Full Name
protein tyrosine phosphatase non-receptor type 20provided by HGNC
Primary source
HGNC:HGNC:23423
See related
Ensembl:ENSG00000204179 MIM:610630; AllianceGenome:HGNC:23423
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CT126; PTPN20A; PTPN20B; bA42B19.1; bA142I17.1
Summary
The product of this gene belongs to the family of classical tyrosine-specific protein tyrosine phosphatases. Many protein tyrosine phosphatases have been shown to regulate fundamental cellular processes. The encoded protein appears to be targeted to sites of actin polymerization. A pseudogene of this gene has been defined on chromosome 10. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2014]
Expression
Broad expression in testis (RPKM 2.2), adrenal (RPKM 1.4) and 18 other tissues See more
Orthologs
mouse all
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Genomic context

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See PTPN20 in Genome Data Viewer
Location:
10q11.22
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (46911428..47003653)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (47800189..47916646)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (48737040..48827934, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene FERM and PDZ domain containing 2 pseudogene Neighboring gene FERM and PDZ domain containing 2B (pseudogene) Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:48600992-48602191 Neighboring gene NANOG hESC enhancer GRCh37_chr10:48563688-48564189 Neighboring gene uncharacterized LOC105378291 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:48510376-48510765 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2353 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:48473688-48474887 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:48460575-48461276 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:48456799-48457326 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:48456269-48456798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:48428532-48429032 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:48426933-48427433 Neighboring gene growth differentiation factor 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Identification of PTPN20 as an innate immunity-related gene in gastric cancer with Helicobacter pylori infection. Ma L, et al. Front Immunol, 2023. PMID 37359510, Free PMC Article
  2. Protein tyrosine phosphatase hPTPN20a is targeted to sites of actin polymerization. Fodero-Tavoletti MT, et al. Biochem J, 2005 Jul 15. PMID 15790311, Free PMC Article
  3. Pair-wise regulation of convergence and extension cell movements by four phosphatases via RhoA. van Eekelen M, et al. PLoS One, 2012. PMID 22545146, Free PMC Article
  4. The DNA sequence and comparative analysis of human chromosome 10. Deloukas P, et al. Nature, 2004 May 27. PMID 15164054
  5. A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome. Yao Z, et al. Mol Cell, 2017 Jan 19. PMID 28065597, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Identification of PTPN20 as an innate immunity-related gene in gastric cancer with Helicobacter pylori infection.
    Title: Identification of PTPN20 as an innate immunity-related gene in gastric cancer with Helicobacter pylori infection.
  2. identification of hPTPN20a as a novel and widely expressed phosphatase with a dynamic subcellular distribution that is targeted to sites of actin polymerization
    Title: Protein tyrosine phosphatase hPTPN20a is targeted to sites of actin polymerization.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • KIAA0187, MGC142033, DKFZp566K0524, DKFZp781P23155

Gene Ontology Provided by GOA

Function Evidence Code Pubs
NOT enables protein tyrosine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in centriolar satellite IDA
Inferred from Direct Assay
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasmic side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm TAS
Traceable Author Statement
more info
  

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 20
Names
protein tyrosine phosphatase, non-receptor type 20A
protein tyrosine phosphatase, non-receptor type 20B
NP_001035816.1
NP_001035817.1
NP_001035818.1
NP_001035819.1
NP_001035820.1
NP_001035821.1
NP_001035822.1
NP_001035823.1
NP_001035824.1
NP_001307610.1
NP_001307611.1
NP_001307612.1
NP_001307613.1
NP_001307614.1
NP_001307615.1
NP_001307617.1
NP_001307618.1
NP_001307619.1
NP_001307620.1
NP_001339450.1
NP_001339451.1
NP_001339452.1
NP_001339453.1
NP_001339454.1
NP_001339455.1
NP_001339456.1
NP_001339457.1
NP_001339458.1
NP_001339459.1
NP_001339460.1
NP_001339461.1
NP_001339462.1
NP_001339463.1
NP_001339464.1
NP_001339465.1
NP_001339466.1
NP_001339467.1
NP_001339468.1
NP_001339469.1
NP_001339470.1
NP_001339471.1
NP_001339472.1
NP_001339473.1
NP_001339474.1
NP_001339475.1
NP_001339476.1
NP_001339477.1
NP_001339478.1
NP_001339479.1
NP_001339480.1
NP_001339481.1
NP_001339482.1
NP_001339483.1
NP_001339484.1
NP_056420.3
XP_011537907.1
XP_011537908.1
XP_011537909.1
XP_011537912.1
XP_016871534.1
XP_047280959.1
XP_047280960.1
XP_047280961.1
XP_047280962.1
XP_047280963.1
XP_047280964.1
XP_047280965.1
XP_047280966.1
XP_047280968.1
XP_047280969.1
XP_047280970.1
XP_047280971.1
XP_047280972.1
XP_047280973.1
XP_047280974.1
XP_047280975.1
XP_047280976.1
XP_047280978.1
XP_047280979.1
XP_047280980.1
XP_047280981.1
XP_047280982.1
XP_047280983.1
XP_047280984.1
XP_047280985.1
XP_047280986.1
XP_047280987.1
XP_047280989.1
XP_047280990.1
XP_054221455.1
XP_054221456.1
XP_054221457.1
XP_054221458.1
XP_054221459.1
XP_054221460.1
XP_054221461.1
XP_054221462.1
XP_054221463.1
XP_054221464.1
XP_054221465.1
XP_054221466.1
XP_054221467.1
XP_054221468.1
XP_054221469.1
XP_054221470.1
XP_054221471.1
XP_054221472.1
XP_054221473.1
XP_054221474.1
XP_054221475.1
XP_054221476.1
XP_054221477.1
XP_054221478.1
XP_054221479.1
XP_054221480.1
XP_054221481.1
XP_054221482.1
XP_054221483.1
XP_054221484.1
XP_054221485.1
XP_054221486.1
XP_054221487.1
XP_054221488.1
XP_054221489.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001042357.5 → NP_001035816.1  tyrosine-protein phosphatase non-receptor type 20 isoform 1

    See identical proteins and their annotated locations for NP_001035816.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AL050040, AL358791, AY704146, BC036539, BC093750, BX648913
    Consensus CDS
    CCDS73110.1
    UniProtKB/Swiss-Prot
    A6NNH8, B7ZKV3, Q4JDG6, Q4JDK1, Q4JDK5, Q4JDK6, Q4JDK8, Q4JDK9, Q4JDL0, Q4JDL1, Q4JDL3, Q4JDL4, Q4JDL5, Q4JDL6, Q4JDL7, Q4JDL8, Q5RJ33, Q5T1G3
    UniProtKB/TrEMBL
    Q5T1G2
    Related
    ENSP00000363459.3, ENST00000374339.5
    Conserved Domains (2) summary
    smart00194
    Location:159 → 411
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:185 → 411
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  2. NM_001042358.5 → NP_001035817.1  tyrosine-protein phosphatase non-receptor type 20 isoform 3

    See identical proteins and their annotated locations for NP_001035817.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and in the 5' coding region, compared to variant 1. The resulting protein (isoform 3) contains a distinct N-terminus, compared to isoform 1.
    Source sequence(s)
    AL358791, AY704141, AY753191, BC036539
    Consensus CDS
    CCDS73105.1
    UniProtKB/TrEMBL
    Q5T1G2
    Related
    ENSP00000424283.1, ENST00000511769.5
    Conserved Domains (1) summary
    smart00194
    Location:150 → 402
    PTPc; Protein tyrosine phosphatase, catalytic domain

  3. NM_001042359.4 → NP_001035818.1  tyrosine-protein phosphatase non-receptor type 20 isoform 4

    See identical proteins and their annotated locations for NP_001035818.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR and in the 5' coding region, compared to variant 1. It also lacks an in-frame segment of the coding region, compared to variant 1. The resulting protein (isoform 4) is shorter and contains a distinct N-terminus, compared to isoform 1.
    Source sequence(s)
    AL358791, AY704141, AY753191, BC036539
    Consensus CDS
    CCDS73107.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000425912.1, ENST00000513156.5
    Conserved Domains (1) summary
    pfam00102
    Location:142 → 260
    Y_phosphatase; Protein-tyrosine phosphatase

  4. NM_001042360.4 → NP_001035819.1  tyrosine-protein phosphatase non-receptor type 20 isoform 5

    See identical proteins and their annotated locations for NP_001035819.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR and in the 5' coding region, compared to variant 1. The resulting protein (isoform 5) contains a distinct N-terminus, compared to isoform 1.
    Source sequence(s)
    AL358791, AY704141, AY753191, BC036539
    Consensus CDS
    CCDS73109.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000379077.2, ENST00000395727.6
    Conserved Domains (1) summary
    cl28904
    Location:16 → 222
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  5. NM_001042361.5 → NP_001035820.1  tyrosine-protein phosphatase non-receptor type 20 isoform 6

    See identical proteins and their annotated locations for NP_001035820.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) has multiple coding region differences, compared to variant 1, one of which results in a frameshift. The resulting protein (isoform 6) contains distinct N- and C-termini, compared to isoform 1.
    Source sequence(s)
    AL358791, AY704141, AY753191, BC036539
    Consensus CDS
    CCDS73106.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000425362.1, ENST00000509774.5
    Conserved Domains (1) summary
    cl27757
    Location:150 → 188
    Y_phosphatase; Protein-tyrosine phosphatase

  6. NM_001042362.4 → NP_001035821.1  tyrosine-protein phosphatase non-receptor type 20 isoform 7

    See identical proteins and their annotated locations for NP_001035821.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) has multiple coding region differences, compared to variant 1, one of which results in a frameshift. The resulting protein (isoform 7) contains distinct N- and C-termini, compared to isoform 1.
    Source sequence(s)
    AL358791, AY704141, AY753191, BC036539
    Consensus CDS
    CCDS73108.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000427676.1, ENST00000503851.5

  7. NM_001042363.5 → NP_001035822.1  tyrosine-protein phosphatase non-receptor type 20 isoform 8

    See identical proteins and their annotated locations for NP_001035822.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start site compared to variant 1. The encoded isoform (8) has a shorter N-terminus compared to isoform 1. Variants 8, 11, and 12 all encode the same isoform (8).
    Source sequence(s)
    AL050040, AL358791, AY704141, BC036539, BX648913
    Consensus CDS
    CCDS73114.1
    UniProtKB/TrEMBL
    Q5T1G2
    Related
    ENSP00000363335.2, ENST00000374218.6
    Conserved Domains (1) summary
    smart00194
    Location:78 → 330
    PTPc; Protein tyrosine phosphatase, catalytic domain

  8. NM_001042364.5 → NP_001035823.1  tyrosine-protein phosphatase non-receptor type 20 isoform 9

    See identical proteins and their annotated locations for NP_001035823.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9) differs in the 5' UTR and has multiple coding region differences, compared to variant 1, one of which results in a frameshift. These differences cause translation initiation at a downstream AUG and a protein (isoform 9) with a distinct C-terminus, compared to isoform 1. Variants 9, 32, and 33 all encode the same isoform (9).
    Source sequence(s)
    AL050040, AL358791, BC036539, BX648913
    Consensus CDS
    CCDS73115.1
    UniProtKB/TrEMBL
    Q5T1G4
    Related
    ENSP00000379075.3, ENST00000395725.7
    Conserved Domains (1) summary
    smart00194
    Location:78 → 116
    PTPc; Protein tyrosine phosphatase, catalytic domain

  9. NM_001042365.4 → NP_001035824.1  tyrosine-protein phosphatase non-receptor type 20 isoform 10

    See identical proteins and their annotated locations for NP_001035824.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10) differs in the 5' UTR and has multiple coding region differences, compared to variant 1, one of which results in a frameshift. These differences cause translation initiation at a downstream AUG and a protein (isoform 10) with a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AL050040, AL358791, BC036539, BX648913
    Consensus CDS
    CCDS73116.1
    UniProtKB/TrEMBL
    G8JLF9, Q4JDK3, Q5H9Q9
    Related
    ENSP00000363462.3, ENST00000374342.6

  10. NM_001320681.2 → NP_001307610.1  tyrosine-protein phosphatase non-receptor type 20 isoform 8

    Status: REVIEWED

    Description
    Transcript Variant: This variant (11) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start site compared to variant 1. The encoded isoform (8) has a shorter N-terminus compared to isoform 1. Variants 8, 11, and 12 all encode the same isoform (8).
    Source sequence(s)
    AL050040, AL358791, AY704141, BC036539, BX648913
    Consensus CDS
    CCDS73114.1
    UniProtKB/TrEMBL
    Q5T1G2
    Related
    ENSP00000379071.2, ENST00000395721.6
    Conserved Domains (1) summary
    smart00194
    Location:78 → 330
    PTPc; Protein tyrosine phosphatase, catalytic domain

  11. NM_001320682.2 → NP_001307611.1  tyrosine-protein phosphatase non-receptor type 20 isoform 11

    Status: REVIEWED

    Description
    Transcript Variant: This variant (13) differs in the 5' UTR and lacks portions of the 5' and 3' coding regions, resulting in a frameshift compared to variant 1. The encoded isoform (11) is shorter than isoform 1. Variants 13-15, 47, and 48 all encode the same isoform (11).
    Source sequence(s)
    AL358791, BC036539, BC143394, CR933668
    UniProtKB/Swiss-Prot
    Q4JDL3
    UniProtKB/TrEMBL
    Q5H9Q9
    Conserved Domains (1) summary
    cl28904
    Location:51 → 86
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  12. NM_001320683.2 → NP_001307612.1  tyrosine-protein phosphatase non-receptor type 20 isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (17) differs in the 5' UTR and lacks two alternate exons in the coding region, resulting in a frameshift compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus compared to isoform 1. Both variants 2 and 17 encode the same isoform (2).
    Source sequence(s)
    AL358791, AY704147, AY753191, BC036539, BC093750
    Consensus CDS
    CCDS73111.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000425012.1, ENST00000509599.5
    Conserved Domains (1) summary
    smart00194
    Location:159 → 197
    PTPc; Protein tyrosine phosphatase, catalytic domain

  13. NM_001320684.2 → NP_001307613.1  tyrosine-protein phosphatase non-receptor type 20 isoform 13

    Status: REVIEWED

    Description
    Transcript Variant: This variant (18) differs in the 5' UTR and lacks three alternate in-frame exons in the coding region compared to variant 1. The encoded isoform (13) is shorter than isoform 1.
    Source sequence(s)
    AL358791, AY704148, AY753191, BC036539, BC143394
    Consensus CDS
    CCDS81454.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000420995.1, ENST00000502705.5
    Conserved Domains (1) summary
    cl21483
    Location:158 → 197
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  14. NM_001320685.2 → NP_001307614.1  tyrosine-protein phosphatase non-receptor type 20 isoform 14

    Status: REVIEWED

    Description
    Transcript Variant: This variant (19) differs in the 5' UTR and lacks one alternate exon in the 5' coding region, resulting in a frameshift compared to variant 1. The encoded isoform (14) is shorter and has a distinct N-terminus compared to isoform 1. Variants 19 and 21 both encode the same isoform (14).
    Source sequence(s)
    AL358791, AY704150, AY753191, BC036539, BX005072
    UniProtKB/TrEMBL
    Q5T1G2
    Conserved Domains (1) summary
    smart00194
    Location:131 → 383
    PTPc; Protein tyrosine phosphatase, catalytic domain

  15. NM_001320686.2 → NP_001307615.1  tyrosine-protein phosphatase non-receptor type 20 isoform 8

    Status: REVIEWED

    Description
    Transcript Variant: This variant (12) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start site compared to variant 1. The encoded isoform (8) has a shorter N-terminus compared to isoform 1. Variants 8, 11, and 12 all encode the same isoform (8).
    Source sequence(s)
    AL358791, AY704152, AY753191, BC036539
    Consensus CDS
    CCDS73114.1
    UniProtKB/TrEMBL
    Q5T1G2
    Related
    ENSP00000426355.1, ENST00000505814.5
    Conserved Domains (1) summary
    smart00194
    Location:78 → 330
    PTPc; Protein tyrosine phosphatase, catalytic domain

  16. NM_001320688.2 → NP_001307617.1  tyrosine-protein phosphatase non-receptor type 20 isoform 15

    Status: REVIEWED

    Description
    Transcript Variant: This variant (20) differs in the 5' UTR and has multiple coding region differences compared to variant 1. The encoded isoform (15) is shorter than isoform 1.
    Source sequence(s)
    AL358791, AY704153, AY753191, BC036539
    Consensus CDS
    CCDS81456.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    Related
    ENSP00000422839.1, ENST00000513266.5
    Conserved Domains (1) summary
    pfam00102
    Location:70 → 188
    Y_phosphatase; Protein-tyrosine phosphatase

  17. NM_001320689.2 → NP_001307618.1  tyrosine-protein phosphatase non-receptor type 20 isoform 11

    Status: REVIEWED

    Description
    Transcript Variant: This variant (14) differs in the 5' UTR and lacks portions of the 5' and 3' coding regions, resulting in a frameshift compared to variant 1. The encoded isoform (11) is shorter than isoform 1. Variants 13-15, 47, and 48 all encode the same isoform (11).
    Source sequence(s)
    AL358791, AY704156, AY753191, BC036539
    UniProtKB/Swiss-Prot
    Q4JDL3
    UniProtKB/TrEMBL
    Q4JDK3
    Conserved Domains (1) summary
    cl28904
    Location:51 → 86
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  18. NM_001320690.2 → NP_001307619.1  tyrosine-protein phosphatase non-receptor type 20 isoform 11

    Status: REVIEWED

    Description
    Transcript Variant: This variant (15) differs in the 5' UTR and lacks portions of the 5' and 3' coding regions, resulting in a frameshift compared to variant 1. The encoded isoform (11) is shorter than isoform 1. Variants 13-15, 47, and 48 all encode the same isoform (11).
    Source sequence(s)
    AL358791, AY704157, AY753191, BC036539
    UniProtKB/Swiss-Prot
    Q4JDL3
    UniProtKB/TrEMBL
    Q4JDK3
    Conserved Domains (1) summary
    cl28904
    Location:51 → 86
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  19. NM_001320691.2 → NP_001307620.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (16) differs in the 5' UTR, lacks a portion of the coding region and initiates translation at a downstream start site compared to variant 1. The encoded isoform (12) has a shorter N-terminus compared to isoform 1. Variants 16 and 25-30 all encode the same isoform (12).
    Source sequence(s)
    AL358791, AY704158, AY753191, BC036539
    UniProtKB/Swiss-Prot
    Q4JDL3
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  20. NM_001352521.2 → NP_001339450.1  tyrosine-protein phosphatase non-receptor type 20 isoform 14

    Status: REVIEWED

    Description
    Transcript Variant: This variant (21), as well as variant 19, encodes isoform 14.
    Source sequence(s)
    AL358791, BX005072
    UniProtKB/TrEMBL
    Q5T1G2
    Conserved Domains (1) summary
    smart00194
    Location:131 → 383
    PTPc; Protein tyrosine phosphatase, catalytic domain

  21. NM_001352522.2 → NP_001339451.1  tyrosine-protein phosphatase non-receptor type 20 isoform 16

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    smart00194
    Location:78 → 258
    PTPc; Protein tyrosine phosphatase, catalytic domain

  22. NM_001352523.2 → NP_001339452.1  tyrosine-protein phosphatase non-receptor type 20 isoform 17

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:131 → 169
    Y_phosphatase; Protein-tyrosine phosphatase

  23. NM_001352524.2 → NP_001339453.1  tyrosine-protein phosphatase non-receptor type 20 isoform 30

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:150 → 188
    Y_phosphatase; Protein-tyrosine phosphatase

  24. NM_001352525.2 → NP_001339454.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (25), as well as variants 16 and 26-30, encodes isoform 12.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  25. NM_001352526.2 → NP_001339455.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (26), as well as variants 16, 25, and 27-30, encodes isoform 12.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  26. NM_001352527.2 → NP_001339456.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (27), as well as variants 16, 25, 26, and 28-30, encodes isoform 12.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  27. NM_001352528.2 → NP_001339457.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (28), as well as variants 16, 25-27, 29, and 30, encodes isoform 12.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  28. NM_001352529.2 → NP_001339458.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (29), as well as variants 16, 25-28, and 30, encodes isoform 12.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  29. NM_001352530.2 → NP_001339459.1  tyrosine-protein phosphatase non-receptor type 20 isoform 12

    Status: REVIEWED

    Description
    Transcript Variant: This variant (30), as well as variants 16 and 25-29, encodes isoform 12.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cd00047
    Location:1 → 170
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  30. NM_001352531.2 → NP_001339460.1  tyrosine-protein phosphatase non-receptor type 20 isoform 31

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Consensus CDS
    CCDS86087.1
    Related
    ENSP00000421404.1, ENST00000502254.5

  31. NM_001352532.2 → NP_001339461.1  tyrosine-protein phosphatase non-receptor type 20 isoform 9

    Status: REVIEWED

    Description
    Transcript Variant: This variant (32), as well as variants 9 and 33, encodes isoform 9.
    Source sequence(s)
    AL358791, BX005072
    Consensus CDS
    CCDS73115.1
    UniProtKB/TrEMBL
    Q5T1G4
    Conserved Domains (1) summary
    smart00194
    Location:78 → 116
    PTPc; Protein tyrosine phosphatase, catalytic domain

  32. NM_001352533.2 → NP_001339462.1  tyrosine-protein phosphatase non-receptor type 20 isoform 9

    Status: REVIEWED

    Description
    Transcript Variant: This variant (33), as well as variants 9 and 32, encodes isoform 9.
    Source sequence(s)
    AL358791, BX005072
    Consensus CDS
    CCDS73115.1
    UniProtKB/TrEMBL
    Q5T1G4
    Related
    ENSP00000423819.1, ENST00000509900.5
    Conserved Domains (1) summary
    smart00194
    Location:78 → 116
    PTPc; Protein tyrosine phosphatase, catalytic domain

  33. NM_001352534.2 → NP_001339463.1  tyrosine-protein phosphatase non-receptor type 20 isoform 18

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:131 → 169
    Y_phosphatase; Protein-tyrosine phosphatase

  34. NM_001352535.2 → NP_001339464.1  tyrosine-protein phosphatase non-receptor type 20 isoform 19

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072

  35. NM_001352536.2 → NP_001339465.1  tyrosine-protein phosphatase non-receptor type 20 isoform 20

    Status: REVIEWED

    Description
    Transcript Variant: This variant (36), as well as variants 37-39, encodes isoform 20.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:78 → 119
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  36. NM_001352537.2 → NP_001339466.1  tyrosine-protein phosphatase non-receptor type 20 isoform 20

    Status: REVIEWED

    Description
    Transcript Variant: This variant (37), as well as variants 36, 38, and 39, encodes isoform 20.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:78 → 119
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  37. NM_001352538.2 → NP_001339467.1  tyrosine-protein phosphatase non-receptor type 20 isoform 20

    Status: REVIEWED

    Description
    Transcript Variant: This variant (38), as well as variants 36, 37, and 39, encodes isoform 20.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:78 → 119
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  38. NM_001352539.2 → NP_001339468.1  tyrosine-protein phosphatase non-receptor type 20 isoform 20

    Status: REVIEWED

    Description
    Transcript Variant: This variant (39), as well as variants 36-38, encodes isoform 20.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:78 → 119
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  39. NM_001352540.2 → NP_001339469.1  tyrosine-protein phosphatase non-receptor type 20 isoform 29

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:78 → 105
    Y_phosphatase; Protein-tyrosine phosphatase

  40. NM_001352541.2 → NP_001339470.1  tyrosine-protein phosphatase non-receptor type 20 isoform 21

    Status: REVIEWED

    Description
    Transcript Variant: This variant (41), as well as variant 42, encodes isoform 21.
    Source sequence(s)
    AL358791, BX005072

  41. NM_001352542.2 → NP_001339471.1  tyrosine-protein phosphatase non-receptor type 20 isoform 21

    Status: REVIEWED

    Description
    Transcript Variant: This variant (42), as well as variant 41, encodes isoform 21.
    Source sequence(s)
    AL358791, BX005072

  42. NM_001352543.2 → NP_001339472.1  tyrosine-protein phosphatase non-receptor type 20 isoform 22

    Status: REVIEWED

    Description
    Transcript Variant: This variant (43), as well as variant 44, encodes isoform 22.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:1 → 98
    Y_phosphatase; Protein-tyrosine phosphatase

  43. NM_001352544.2 → NP_001339473.1  tyrosine-protein phosphatase non-receptor type 20 isoform 22

    Status: REVIEWED

    Description
    Transcript Variant: This variant (44), as well as variant 43, encodes isoform 22.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:1 → 98
    Y_phosphatase; Protein-tyrosine phosphatase

  44. NM_001352545.2 → NP_001339474.1  tyrosine-protein phosphatase non-receptor type 20 isoform 23

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:57 → 95
    Y_phosphatase; Protein-tyrosine phosphatase

  45. NM_001352546.2 → NP_001339475.1  tyrosine-protein phosphatase non-receptor type 20 isoform 24

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:48 → 86
    Y_phosphatase; Protein-tyrosine phosphatase

  46. NM_001352547.2 → NP_001339476.1  tyrosine-protein phosphatase non-receptor type 20 isoform 11

    Status: REVIEWED

    Description
    Transcript Variant: This variant (47), as well as variants 13-15 and 48, encodes isoform 11.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:51 → 86
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  47. NM_001352548.2 → NP_001339477.1  tyrosine-protein phosphatase non-receptor type 20 isoform 11

    Status: REVIEWED

    Description
    Transcript Variant: This variant (48), as well as variants 13-15 and 47, encodes isoform 11.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:51 → 86
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  48. NM_001352549.2 → NP_001339478.1  tyrosine-protein phosphatase non-receptor type 20 isoform 25

    Status: REVIEWED

    Description
    Transcript Variant: This variant (49), as well as variant 50, encodes isoform 25.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:51 → 72
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  49. NM_001352550.2 → NP_001339479.1  tyrosine-protein phosphatase non-receptor type 20 isoform 25

    Status: REVIEWED

    Description
    Transcript Variant: This variant (50), as well as variant 49, encodes isoform 25.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:51 → 72
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  50. NM_001352551.2 → NP_001339480.1  tyrosine-protein phosphatase non-receptor type 20 isoform 26

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl27757
    Location:41 → 73
    Y_phosphatase; Protein-tyrosine phosphatase

  51. NM_001352552.2 → NP_001339481.1  tyrosine-protein phosphatase non-receptor type 20 isoform 27

    Status: REVIEWED

    Description
    Transcript Variant: This variant (52), as well as variants 53 and 54, encodes isoform 27.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:1 → 66
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  52. NM_001352553.2 → NP_001339482.1  tyrosine-protein phosphatase non-receptor type 20 isoform 27

    Status: REVIEWED

    Description
    Transcript Variant: This variant (53), as well as variants 52 and 54, encodes isoform 27.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:1 → 66
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  53. NM_001352554.2 → NP_001339483.1  tyrosine-protein phosphatase non-receptor type 20 isoform 27

    Status: REVIEWED

    Description
    Transcript Variant: This variant (54), as well as variants 52 and 53, encodes isoform 27.
    Source sequence(s)
    AL358791, BX005072
    Conserved Domains (1) summary
    cl28904
    Location:1 → 66
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  54. NM_001352555.2 → NP_001339484.1  tyrosine-protein phosphatase non-receptor type 20 isoform 28

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072
    UniProtKB/TrEMBL
    Q5H9Q9

  55. NM_015605.9 → NP_056420.3  tyrosine-protein phosphatase non-receptor type 20 isoform 2

    See identical proteins and their annotated locations for NP_056420.3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR and lacks two alternate exons in the coding region, resulting in a frameshift compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus compared to isoform 1. Both variants 2 and 17 encode the same isoform (2).
    Source sequence(s)
    AL050040, AL358791, AY704146, BC036539, BC093750, BX648913
    Consensus CDS
    CCDS73111.1
    UniProtKB/Swiss-Prot
    Q4JDL3
    UniProtKB/TrEMBL
    Q9Y406
    Related
    ENSP00000363466.3, ENST00000374346.7
    Conserved Domains (1) summary
    smart00194
    Location:159 → 197
    PTPc; Protein tyrosine phosphatase, catalytic domain

RNA

  1. NR_148022.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072

  2. NR_148023.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072

  3. NR_148024.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AL358791, BX005072

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    46911428..47003653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047425027.1 → XP_047280983.1  tyrosine-protein phosphatase non-receptor type 20 isoform X23

  2. XM_047425033.1 → XP_047280989.1  tyrosine-protein phosphatase non-receptor type 20 isoform X27

  3. XM_047425013.1 → XP_047280969.1  tyrosine-protein phosphatase non-receptor type 20 isoform X12

  4. XM_047425034.1 → XP_047280990.1  tyrosine-protein phosphatase non-receptor type 20 isoform X27

  5. XM_047425031.1 → XP_047280987.1  tyrosine-protein phosphatase non-receptor type 20 isoform X26

    UniProtKB/TrEMBL
    G8JLF9, Q4JDK3
    Related
    ENSP00000379072.4, ENST00000395722.7

  6. XM_011539610.3 → XP_011537912.1  tyrosine-protein phosphatase non-receptor type 20 isoform X7

    See identical proteins and their annotated locations for XP_011537912.1

    UniProtKB/TrEMBL
    Q5T1G2
    Conserved Domains (1) summary
    smart00194
    Location:78 → 330
    PTPc; Protein tyrosine phosphatase, catalytic domain

  7. XM_047425010.1 → XP_047280966.1  tyrosine-protein phosphatase non-receptor type 20 isoform X10

  8. XM_047425028.1 → XP_047280984.1  tyrosine-protein phosphatase non-receptor type 20 isoform X23

  9. XM_047425012.1 → XP_047280968.1  tyrosine-protein phosphatase non-receptor type 20 isoform X11

  10. XM_011539605.3 → XP_011537907.1  tyrosine-protein phosphatase non-receptor type 20 isoform X1

    See identical proteins and their annotated locations for XP_011537907.1

    UniProtKB/Swiss-Prot
    A6NNH8, B7ZKV3, Q4JDG6, Q4JDK1, Q4JDK5, Q4JDK6, Q4JDK8, Q4JDK9, Q4JDL0, Q4JDL1, Q4JDL3, Q4JDL4, Q4JDL5, Q4JDL6, Q4JDL7, Q4JDL8, Q5RJ33, Q5T1G3
    UniProtKB/TrEMBL
    Q5T1G2
    Conserved Domains (2) summary
    smart00194
    Location:159 → 411
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:185 → 411
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  11. XM_047425018.1 → XP_047280974.1  tyrosine-protein phosphatase non-receptor type 20 isoform X17

  12. XM_011539607.3 → XP_011537909.1  tyrosine-protein phosphatase non-receptor type 20 isoform X1

    See identical proteins and their annotated locations for XP_011537909.1

    UniProtKB/Swiss-Prot
    A6NNH8, B7ZKV3, Q4JDG6, Q4JDK1, Q4JDK5, Q4JDK6, Q4JDK8, Q4JDK9, Q4JDL0, Q4JDL1, Q4JDL3, Q4JDL4, Q4JDL5, Q4JDL6, Q4JDL7, Q4JDL8, Q5RJ33, Q5T1G3
    UniProtKB/TrEMBL
    Q5T1G2
    Conserved Domains (2) summary
    smart00194
    Location:159 → 411
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:185 → 411
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  13. XM_047425025.1 → XP_047280981.1  tyrosine-protein phosphatase non-receptor type 20 isoform X21

  14. XM_047425004.1 → XP_047280960.1  tyrosine-protein phosphatase non-receptor type 20 isoform X3

  15. XM_047425008.1 → XP_047280964.1  tyrosine-protein phosphatase non-receptor type 20 isoform X8

  16. XM_047425007.1 → XP_047280963.1  tyrosine-protein phosphatase non-receptor type 20 isoform X7

  17. XM_047425030.1 → XP_047280986.1  tyrosine-protein phosphatase non-receptor type 20 isoform X25

  18. XM_047425029.1 → XP_047280985.1  tyrosine-protein phosphatase non-receptor type 20 isoform X24

  19. XM_047425003.1 → XP_047280959.1  tyrosine-protein phosphatase non-receptor type 20 isoform X2

  20. XM_011539606.4 → XP_011537908.1  tyrosine-protein phosphatase non-receptor type 20 isoform X1

    See identical proteins and their annotated locations for XP_011537908.1

    UniProtKB/Swiss-Prot
    A6NNH8, B7ZKV3, Q4JDG6, Q4JDK1, Q4JDK5, Q4JDK6, Q4JDK8, Q4JDK9, Q4JDL0, Q4JDL1, Q4JDL3, Q4JDL4, Q4JDL5, Q4JDL6, Q4JDL7, Q4JDL8, Q5RJ33, Q5T1G3
    UniProtKB/TrEMBL
    Q5T1G2
    Conserved Domains (2) summary
    smart00194
    Location:159 → 411
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:185 → 411
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  21. XM_047425006.1 → XP_047280962.1  tyrosine-protein phosphatase non-receptor type 20 isoform X6

  22. XM_047425017.1 → XP_047280973.1  tyrosine-protein phosphatase non-receptor type 20 isoform X16

  23. XM_047425015.1 → XP_047280971.1  tyrosine-protein phosphatase non-receptor type 20 isoform X14

  24. XM_047425026.1 → XP_047280982.1  tyrosine-protein phosphatase non-receptor type 20 isoform X22

  25. XM_047425005.1 → XP_047280961.1  tyrosine-protein phosphatase non-receptor type 20 isoform X4

  26. XM_047425024.1 → XP_047280980.1  tyrosine-protein phosphatase non-receptor type 20 isoform X20

  27. XM_047425019.1 → XP_047280975.1  tyrosine-protein phosphatase non-receptor type 20 isoform X18

  28. XM_047425014.1 → XP_047280970.1  tyrosine-protein phosphatase non-receptor type 20 isoform X13

  29. XM_047425016.1 → XP_047280972.1  tyrosine-protein phosphatase non-receptor type 20 isoform X15

  30. XM_047425009.1 → XP_047280965.1  tyrosine-protein phosphatase non-receptor type 20 isoform X9

  31. XM_047425020.1 → XP_047280976.1  tyrosine-protein phosphatase non-receptor type 20 isoform X19

  32. XM_017016045.2 → XP_016871534.1  tyrosine-protein phosphatase non-receptor type 20 isoform X5

  33. XM_047425023.1 → XP_047280979.1  tyrosine-protein phosphatase non-receptor type 20 isoform X19

  34. XM_047425022.1 → XP_047280978.1  tyrosine-protein phosphatase non-receptor type 20 isoform X19

RNA

  1. XR_007061954.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    47800189..47916646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054365480.1 → XP_054221455.1  tyrosine-protein phosphatase non-receptor type 20 isoform X28

  2. XM_054365488.1 → XP_054221463.1  tyrosine-protein phosphatase non-receptor type 20 isoform X34

  3. XM_054365509.1 → XP_054221484.1  tyrosine-protein phosphatase non-receptor type 20 isoform X23

  4. XM_054365513.1 → XP_054221488.1  tyrosine-protein phosphatase non-receptor type 20 isoform X27

  5. XM_054365489.1 → XP_054221464.1  tyrosine-protein phosphatase non-receptor type 20 isoform X34

  6. XM_054365499.1 → XP_054221474.1  tyrosine-protein phosphatase non-receptor type 20 isoform X12

  7. XM_054365514.1 → XP_054221489.1  tyrosine-protein phosphatase non-receptor type 20 isoform X27

  8. XM_054365512.1 → XP_054221487.1  tyrosine-protein phosphatase non-receptor type 20 isoform X26

    UniProtKB/TrEMBL
    G8JLF9, Q4JDK3

  9. XM_054365491.1 → XP_054221466.1  tyrosine-protein phosphatase non-receptor type 20 isoform X34

  10. XM_054365494.1 → XP_054221469.1  tyrosine-protein phosphatase non-receptor type 20 isoform X7

  11. XM_054365497.1 → XP_054221472.1  tyrosine-protein phosphatase non-receptor type 20 isoform X10

  12. XM_054365510.1 → XP_054221485.1  tyrosine-protein phosphatase non-receptor type 20 isoform X23

  13. XM_054365498.1 → XP_054221473.1  tyrosine-protein phosphatase non-receptor type 20 isoform X11

  14. XM_054365481.1 → XP_054221456.1  tyrosine-protein phosphatase non-receptor type 20 isoform X28

  15. XM_054365483.1 → XP_054221458.1  tyrosine-protein phosphatase non-receptor type 20 isoform X30

  16. XM_054365505.1 → XP_054221480.1  tyrosine-protein phosphatase non-receptor type 20 isoform X17

  17. XM_054365492.1 → XP_054221467.1  tyrosine-protein phosphatase non-receptor type 20 isoform X35

  18. XM_054365484.1 → XP_054221459.1  tyrosine-protein phosphatase non-receptor type 20 isoform X31

  19. XM_054365490.1 → XP_054221465.1  tyrosine-protein phosphatase non-receptor type 20 isoform X34

  20. XM_054365511.1 → XP_054221486.1  tyrosine-protein phosphatase non-receptor type 20 isoform X25

  21. XM_054365482.1 → XP_054221457.1  tyrosine-protein phosphatase non-receptor type 20 isoform X29

  22. XM_054365487.1 → XP_054221462.1  tyrosine-protein phosphatase non-receptor type 20 isoform X33

  23. XM_054365486.1 → XP_054221461.1  tyrosine-protein phosphatase non-receptor type 20 isoform X1

    UniProtKB/Swiss-Prot
    A6NNH8, B7ZKV3, Q4JDG6, Q4JDK1, Q4JDK5, Q4JDK6, Q4JDK8, Q4JDK9, Q4JDL0, Q4JDL1, Q4JDL3, Q4JDL4, Q4JDL5, Q4JDL6, Q4JDL7, Q4JDL8, Q5RJ33, Q5T1G3

  24. XM_054365493.1 → XP_054221468.1  tyrosine-protein phosphatase non-receptor type 20 isoform X6

  25. XM_054365503.1 → XP_054221478.1  tyrosine-protein phosphatase non-receptor type 20 isoform X16

  26. XM_054365501.1 → XP_054221476.1  tyrosine-protein phosphatase non-receptor type 20 isoform X14

  27. XM_054365508.1 → XP_054221483.1  tyrosine-protein phosphatase non-receptor type 20 isoform X22

  28. XM_054365485.1 → XP_054221460.1  tyrosine-protein phosphatase non-receptor type 20 isoform X32

  29. XM_054365507.1 → XP_054221482.1  tyrosine-protein phosphatase non-receptor type 20 isoform X20

  30. XM_054365504.1 → XP_054221479.1  tyrosine-protein phosphatase non-receptor type 20 isoform X37

  31. XM_054365496.1 → XP_054221471.1  tyrosine-protein phosphatase non-receptor type 20 isoform X36

  32. XM_054365500.1 → XP_054221475.1  tyrosine-protein phosphatase non-receptor type 20 isoform X13

  33. XM_054365502.1 → XP_054221477.1  tyrosine-protein phosphatase non-receptor type 20 isoform X15

  34. XM_054365495.1 → XP_054221470.1  tyrosine-protein phosphatase non-receptor type 20 isoform X9

  35. XM_054365506.1 → XP_054221481.1  tyrosine-protein phosphatase non-receptor type 20 isoform X19

RNA

  1. XR_008488193.1 RNA Sequence

  2. XR_008488194.1 RNA Sequence

  3. XR_008488195.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001042387.1: Suppressed sequence

    Description
    NM_001042387.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  2. NM_001042389.1: Suppressed sequence

    Description
    NM_001042389.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  3. NM_001042390.1: Suppressed sequence

    Description
    NM_001042390.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  4. NM_001042391.1: Suppressed sequence

    Description
    NM_001042391.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  5. NM_001042392.1: Suppressed sequence

    Description
    NM_001042392.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  6. NM_001042393.1: Suppressed sequence

    Description
    NM_001042393.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  7. NM_001042394.1: Suppressed sequence

    Description
    NM_001042394.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  8. NM_001042395.1: Suppressed sequence

    Description
    NM_001042395.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  9. NM_001042396.1: Suppressed sequence

    Description
    NM_001042396.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.

  10. NM_001042397.1: Suppressed sequence

    Description
    NM_001042397.1: This RefSeq was permanently suppressed because it is a redundant RefSeq for this protein tyrosine phosphatase family member.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4JDL3.1 GenPept UniProtKB/Swiss-Prot:Q4JDL3

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