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Or6d12 olfactory receptor family 6 subfamily D member 12 [ Mus musculus (house mouse) ]

Gene ID: 258019, updated on 11-Apr-2024

Summary

Official Symbol
Or6d12provided by MGI
Official Full Name
olfactory receptor family 6 subfamily D member 12provided by MGI
Primary source
MGI:MGI:3030046
See related
Ensembl:ENSMUSG00000053251 AllianceGenome:MGI:3030046
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Olfr212; MOR119-4; 4931403F16Rik
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Expression
Restricted expression toward testis adult (RPKM 1.2) See more
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Genomic context

Location:
6 E3; 6 53.81 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (116483477..116494926)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (116506516..116517965)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 38880 Neighboring gene arachidonate 5-lipoxygenase Neighboring gene olfactory receptor family 13 subfamily A member 1 Neighboring gene STARR-seq mESC enhancer starr_17104 Neighboring gene olfactory receptor family 6 subfamily D member 13 Neighboring gene eukaryotic translation initiation factor 4A3 like 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General protein information

Preferred Names
olfactory receptor 212
Names
GA_x54KRFPKN04-58149882-58150865
olfactory receptor MOR119-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001011800.2NP_001011800.1  olfactory receptor 212

    See identical proteins and their annotated locations for NP_001011800.1

    Status: VALIDATED

    Source sequence(s)
    AC132334, AK029829
    Consensus CDS
    CCDS20454.1
    UniProtKB/TrEMBL
    B2RU76, Q7TS33
    Related
    ENSMUSP00000075164.3, ENSMUST00000075756.3
    Conserved Domains (2) summary
    pfam00001
    Location:47296
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:39312
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    116483477..116494926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)