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FBXO33 F-box protein 33 [ Homo sapiens (human) ]

Gene ID: 254170, updated on 5-Mar-2024

Summary

Official Symbol
FBXO33provided by HGNC
Official Full Name
F-box protein 33provided by HGNC
Primary source
HGNC:HGNC:19833
See related
Ensembl:ENSG00000165355 MIM:609103; AllianceGenome:HGNC:19833
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Fbx33; BMND12; c14_5247
Summary
This locus represents an member of the F-box gene family. The encoded protein contains an F-box motif and a domain that might form a structure similar to a leucine-rich repeat found in placental RNAse inhibitor. This locus may be associated with copy number variation of UGT2B17 (GeneID 7367), which has been associated with susceptibility to osteoporosis.[provided by RefSeq, Sep 2010]
Expression
Ubiquitous expression in bone marrow (RPKM 14.0), testis (RPKM 6.8) and 24 other tissues See more
Orthologs
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Genomic context

Location:
14q21.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (39397684..39432433, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (33586312..33624046, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (39866888..39901637, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene MIA SH3 domain ER export factor 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:39839297-39839798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:39839799-39840298 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5689 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5690 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8290 Neighboring gene uncharacterized LOC105370461 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5691 Neighboring gene GLRX5 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8291 Neighboring gene uncharacterized LOC105370460 Neighboring gene coilin pseudogene 1 Neighboring gene uncharacterized LOC112267899 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:40007098-40007598 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:40007599-40008099 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40058588-40059177 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:40108076-40108576 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:40108577-40109077 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40142297-40143002 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40143003-40143708 Neighboring gene NANOG hESC enhancer GRCh37_chr14:40203453-40203986 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:40250573-40251083 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:40317773-40317946 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8292 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8293 Neighboring gene uncharacterized LOC105370464 Neighboring gene uncharacterized LOC105370463

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_027725.1 RefSeqGene

    Range
    5068..39817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_203301.4NP_976046.1  F-box only protein 33

    See identical proteins and their annotated locations for NP_976046.1

    Status: VALIDATED

    Source sequence(s)
    AL049875, AL157791
    Consensus CDS
    CCDS9677.1
    UniProtKB/Swiss-Prot
    Q6PIR2, Q7Z6M2, Q86TR2, Q86YE0
    Related
    ENSP00000298097.7, ENST00000298097.8
    Conserved Domains (1) summary
    pfam12937
    Location:69116
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    39397684..39432433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    33586312..33624046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)