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TTTY23 testis expressed transcript, Y-linked 23 [ Homo sapiens (human) ]

Gene ID: 252955, updated on 10-Oct-2023

Summary

Official Symbol
TTTY23provided by HGNC
Official Full Name
testis expressed transcript, Y-linked 23provided by HGNC
Primary source
HGNC:HGNC:18847
See related
Ensembl:ENSG00000239225 AllianceGenome:HGNC:18847
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTTY23B; NCRNA00148
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
Yp11.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (9910798..9911962)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (10229853..10231017)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (9748407..9749571)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene testis specific protein Y-linked 18, pseudogene Neighboring gene testis specific protein Y-linked 13, pseudogene Neighboring gene RNA binding motif protein Y-linked family 2 member O, pseudogene Neighboring gene RNA binding motif protein Y-linked family 2 member Q, pseudogene Neighboring gene testis specific protein Y-linked 20, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • testis-specific transcript, Y-linked 23 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001540.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF527836
    Related
    ENST00000452889.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    9910798..9911962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    10229853..10231017
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)