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TTTY16 testis expressed transcript, Y-linked 16 [ Homo sapiens (human) ]

Gene ID: 252948, updated on 10-Oct-2023

Summary

Official Symbol
TTTY16provided by HGNC
Official Full Name
testis expressed transcript, Y-linked 16provided by HGNC
Primary source
HGNC:HGNC:18840
See related
AllianceGenome:HGNC:18840
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00139
Expression
Low expression observed in reference dataset See more
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Genomic context

See TTTY16 in Genome Data Viewer
Location:
Yp11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (7699357..7701247, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (7352030..7353920, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (7567398..7569288, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein Y-linked family 2 member H, pseudogene Neighboring gene testis specific protein Y-linked 12, pseudogene Neighboring gene raftlin, lipid raft linker 1 pseudogene 1 Neighboring gene uncharacterized LOC107987339 Neighboring gene testis expressed transcript, Y-linked 12

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • testis-specific transcript, Y-linked 16 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001552.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF527828

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    7699357..7701247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    7352030..7353920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)