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Fcgr4 Fc receptor, IgG, low affinity IV [ Mus musculus (house mouse) ]

Gene ID: 246256, updated on 25-Apr-2024

Summary

Official Symbol
Fcgr4provided by MGI
Official Full Name
Fc receptor, IgG, low affinity IVprovided by MGI
Primary source
MGI:MGI:2179523
See related
Ensembl:ENSMUSG00000059089 AllianceGenome:MGI:2179523
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fcrl3; CD16-2; FcgRIV; Fcgr3a; FcgammaRIV; 4833442P21Rik
Summary
Enables IgE receptor activity and IgG receptor activity. Involved in neutrophil activation and positive regulation of bone resorption. Located in cell surface. Is expressed in liver. Human ortholog(s) of this gene implicated in several diseases, including allergic disease (multiple); autoimmune disease (multiple); glomerulonephritis (multiple); hematologic cancer (multiple); and immunodeficiency 20. Orthologous to human FCGR3A (Fc fragment of IgG receptor IIIa) and FCGR3B (Fc fragment of IgG receptor IIIb). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in liver E18 (RPKM 7.9), spleen adult (RPKM 4.1) and 17 other tissues See more
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Genomic context

Location:
1 H3; 1 78.53 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (170846495..170857330)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (171018926..171029761)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34968 Neighboring gene STARR-seq mESC enhancer starr_03005 Neighboring gene predicted gene 10522 Neighboring gene STARR-positive B cell enhancer ABC_E10055 Neighboring gene STARR-positive B cell enhancer ABC_E10056 Neighboring gene predicted gene, 26110 Neighboring gene STARR-positive B cell enhancer ABC_E1235 Neighboring gene STARR-positive B cell enhancer ABC_E629 Neighboring gene nuclear encoded tRNA asparagine 6 (anticodon GTT) Neighboring gene predicted gene, 35090 Neighboring gene nuclear encoded tRNA aspartic acid 4 (anticodon GTC)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (6) 
  • Gene trapped (1) 
  • Targeted (5)  1 citation

Pathways from PubChem

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GPI anchor binding ISO
Inferred from Sequence Orthology
more info
 
enables IgE binding IEA
Inferred from Electronic Annotation
more info
 
enables IgE receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables IgG binding IEA
Inferred from Electronic Annotation
more info
 
enables IgG receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables IgG receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables immune receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables immune receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables low-affinity IgG receptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in Fc receptor-mediated immune complex endocytosis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in antibody-dependent cellular cytotoxicity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell surface receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to lipopolysaccharide ISO
Inferred from Sequence Orthology
more info
 
involved_in dendritic cell antigen processing and presentation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
involved_in natural killer cell degranulation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in neutrophil activation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in perforin production ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of bone resorption IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of Fc-gamma receptor III complex ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
low affinity immunoglobulin gamma Fc region receptor III-A
Names
Fc fragment of IgG, low affinity IIIa, receptor for (CD16); Fc fragment of IgG, low affinity III, receptor for (CD16)
Fc gammaRIV
Fc receptor-like 3
IgG Fc receptor III-A
low affinity immunoglobulin gamma Fc region receptor IV

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_144559.2NP_653142.2  low affinity immunoglobulin gamma Fc region receptor III-A precursor

    See identical proteins and their annotated locations for NP_653142.2

    Status: VALIDATED

    Source sequence(s)
    AC115959, AK076532, AK087863
    Consensus CDS
    CCDS15476.1
    UniProtKB/Swiss-Prot
    A0A0B4J1G0, Q3TC44, Q8R2R4, Q8R477
    Related
    ENSMUSP00000077873.5, ENSMUST00000078825.5
    Conserved Domains (2) summary
    cd05752
    Location:25103
    Ig1_FcgammaR_like; Frst immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs) and similar proteins
    cd05753
    Location:107188
    Ig2_FcgammaR_like; Second immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs) and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    170846495..170857330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_180961.1: Suppressed sequence

    Description
    NM_180961.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.