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AA414768 expressed sequence AA414768 [ Mus musculus (house mouse) ]

Gene ID: 245350, updated on 5-Mar-2024

Summary

Official Symbol
AA414768provided by MGI
Official Full Name
expressed sequence AA414768provided by MGI
Primary source
MGI:MGI:3035137
See related
AllianceGenome:MGI:3035137
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
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Genomic context

See AA414768 in Genome Data Viewer
Location:
X A1.1; X 7.8 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (12803112..12804780)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (12936873..12938541)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 14 Neighboring gene predicted gene, 52422 Neighboring gene STARR-seq mESC enhancer starr_46762 Neighboring gene predicted gene 14634 Neighboring gene STARR-seq mESC enhancer starr_46765 Neighboring gene STARR-seq mESC enhancer starr_46768 Neighboring gene STARR-seq mESC enhancer starr_46771 Neighboring gene STARR-seq mESC enhancer starr_46772 Neighboring gene peptidylprolyl isomerase A pseudogene x_132.1 Neighboring gene RIKEN cDNA 4930500G05 gene Neighboring gene predicted gene, 41890

Genomic regions, transcripts, and products

General protein information

Preferred Names
ubiquitin-conjugating enzyme E2 Q2-like
Names
ubiquitin-conjugating enzyme E2Q (putative) 2 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001272033.1NP_001258962.1  ubiquitin-conjugating enzyme E2 Q2-like

    Status: VALIDATED

    Source sequence(s)
    AL808107, AW122385, BG086291
    Conserved Domains (2) summary
    cd00195
    Location:218343
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    pfam05773
    Location:887
    RWD; RWD domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    12803112..12804780
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_017139.1: Suppressed sequence

    Description
    NG_017139.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.