U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Defb14 defensin beta 14 [ Mus musculus (house mouse) ]

Gene ID: 244332, updated on 11-Apr-2024

Summary

Official Symbol
Defb14provided by MGI
Official Full Name
defensin beta 14provided by MGI
Primary source
MGI:MGI:2675345
See related
Ensembl:ENSMUSG00000046354 AllianceGenome:MGI:2675345
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BD-14
Summary
Enables chemoattractant activity. Acts upstream of or within cell chemotaxis and defense response to bacterium. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in skin. Orthologous to several human genes including DEFB103A (defensin beta 103A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in genital fat pad adult (RPKM 5.3) and testis adult (RPKM 2.8) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
8 A1.3; 8 10.35 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (19213172..19245342)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (19160244..19195309)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 11A Neighboring gene predicted gene, 53432 Neighboring gene predicted gene, 39139 Neighboring gene STARR-seq mESC enhancer starr_20861 Neighboring gene defensin beta 4 Neighboring gene defensin, alpha, pseudogene 12

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables CCR6 chemokine receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chemoattractant activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chemoattractant activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in cell chemotaxis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cell chemotaxis IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within defense response IEA
Inferred from Electronic Annotation
more info
 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 
involved_in defense response to bacterium IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within defense response to bacterium IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within defense response to bacterium ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within positive chemotaxis IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within signal transduction IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183026.3NP_898847.1  beta-defensin 14 precursor

    See identical proteins and their annotated locations for NP_898847.1

    Status: VALIDATED

    Source sequence(s)
    AC116394
    Consensus CDS
    CCDS40253.1
    UniProtKB/Swiss-Prot
    Q14BD1, Q7TNV9
    Related
    ENSMUSP00000062781.4, ENSMUST00000052601.4
    Conserved Domains (1) summary
    pfam00711
    Location:3064
    Defensin_beta; Beta defensin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    19213172..19245342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006508792.4XP_006508855.1  beta-defensin 14 isoform X1

    See identical proteins and their annotated locations for XP_006508855.1

    UniProtKB/Swiss-Prot
    Q14BD1, Q7TNV9
    Conserved Domains (1) summary
    pfam00711
    Location:3064
    Defensin_beta; Beta defensin
  2. XM_006508794.4XP_006508857.1  beta-defensin 14 isoform X1

    See identical proteins and their annotated locations for XP_006508857.1

    UniProtKB/Swiss-Prot
    Q14BD1, Q7TNV9
    Conserved Domains (1) summary
    pfam00711
    Location:3064
    Defensin_beta; Beta defensin
  3. XM_006508795.4XP_006508858.1  beta-defensin 14 isoform X1

    See identical proteins and their annotated locations for XP_006508858.1

    UniProtKB/Swiss-Prot
    Q14BD1, Q7TNV9
    Conserved Domains (1) summary
    pfam00711
    Location:3064
    Defensin_beta; Beta defensin
  4. XM_006508797.4XP_006508860.1  beta-defensin 14 isoform X1

    See identical proteins and their annotated locations for XP_006508860.1

    UniProtKB/Swiss-Prot
    Q14BD1, Q7TNV9
    Conserved Domains (1) summary
    pfam00711
    Location:3064
    Defensin_beta; Beta defensin