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Igkv1-135 immunoglobulin kappa variable 1-135 [ Mus musculus (house mouse) ]

Gene ID: 243420, updated on 8-Feb-2024

Summary

Official Symbol
Igkv1-135provided by MGI
Official Full Name
immunoglobulin kappa variable 1-135provided by MGI
Primary source
MGI:MGI:3819952
See related
Ensembl:ENSMUSG00000096336 IMGT/GENE-DB:IGKV1-135; AllianceGenome:MGI:3819952
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
bd2; Gm4964
Summary
Predicted to be involved in immune response. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Igkv1-135 in Genome Data Viewer
Location:
6 C1; 6 30.91 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (67586729..67587492)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (67609745..67610508)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene myc induced nuclear antigen pseudogene Neighboring gene STARR-seq mESC enhancer starr_16187 Neighboring gene STARR-seq mESC enhancer starr_16188 Neighboring gene immunoglobulin kappa chain variable 1-136 Neighboring gene ribosomal protein L18A, pseudogene 2 Neighboring gene tubulin, alpha 1A pseudogene Neighboring gene immunoglobulin kappa chain complex

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • Ig kappa chain
  • IgG1/kappa antibody
  • immunoglobulin kappa chain variable 1-135
  • immunoglobulin light chain variable region
  • predictd gene, 243420

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in immunoglobulin production IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005612.1 

    Range
    54765..55528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    67586729..67587492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)