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Tecrl trans-2,3-enoyl-CoA reductase-like [ Mus musculus (house mouse) ]

Gene ID: 243078, updated on 11-Apr-2024

Summary

Official Symbol
Tecrlprovided by MGI
Official Full Name
trans-2,3-enoyl-CoA reductase-likeprovided by MGI
Primary source
MGI:MGI:2444966
See related
Ensembl:ENSMUSG00000049537 AllianceGenome:MGI:2444966
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Srd5a2l2; D330017N19Rik
Summary
Predicted to enable oxidoreductase activity. Predicted to be involved in very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in catecholaminergic polymorphic ventricular tachycardia 3. Orthologous to human TECRL (trans-2,3-enoyl-CoA reductase like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward heart adult (RPKM 12.9) See more
Orthologs
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Genomic context

Location:
5 E1; 5 43.0 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (83425969..83503042, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (83278122..83355195, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene 43217 Neighboring gene STARR-seq mESC enhancer starr_13520 Neighboring gene STARR-seq mESC enhancer starr_13521 Neighboring gene STARR-seq mESC enhancer starr_13522 Neighboring gene predicted gene, 52850 Neighboring gene STARR-seq mESC enhancer starr_13523 Neighboring gene STARR-seq mESC enhancer starr_13524 Neighboring gene STARR-seq mESC enhancer starr_13525 Neighboring gene predicted gene, 25765 Neighboring gene predicted gene, 25806

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Clone Names

  • MGC130344, MGC130345

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables oxidoreductase activity, acting on the CH-CH group of donors IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in very long-chain fatty acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
trans-2,3-enoyl-CoA reductase-like
Names
steroid 5 alpha-reductase 2-like 2
steroid 5-alpha-reductase 2-like 2 protein
synaptic glycoprotein SC2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153801.3NP_722496.2  trans-2,3-enoyl-CoA reductase-like

    See identical proteins and their annotated locations for NP_722496.2

    Status: VALIDATED

    Source sequence(s)
    AK052284, AK052378, CJ066147
    Consensus CDS
    CCDS19375.1
    UniProtKB/Swiss-Prot
    Q8BFZ1, Q8CIX3
    UniProtKB/TrEMBL
    Q8BWI9
    Related
    ENSMUSP00000062122.5, ENSMUST00000053543.11
    Conserved Domains (2) summary
    cl00155
    Location:60135
    UBQ; Ubiquitin-like proteins
    cl21511
    Location:210361
    PEMT; Phospholipid methyltransferase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    83425969..83503042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)