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Gm4961 predicted pseudogene 4961 [ Mus musculus (house mouse) ]

Gene ID: 242914, updated on 8-Feb-2024

Summary

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Official Symbol
Gm4961provided by MGI
Official Full Name
predicted pseudogene 4961provided by MGI
Gene description
kinesin superfamily protein 2C pseudogene
Primary source
MGI:MGI:3645260
See related
Ensembl:ENSMUSG00000104667 AllianceGenome:MGI:3645260
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kif2c; Gm19623; EG242914
Expression
Biased expression in testis adult (RPKM 1.5), placenta adult (RPKM 0.7) and 13 other tissues See more
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Genomic context

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Location:
5 B1; 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (30297938..30302684)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (30092940..30097686)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A230098N10 gene Neighboring gene interleukin 6 Neighboring gene STARR-seq mESC enhancer starr_12745 Neighboring gene STARR-seq mESC enhancer starr_12746 Neighboring gene thymidylate synthase Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:30400119-30400228 Neighboring gene STARR-seq mESC enhancer starr_12748 Neighboring gene STARR-seq mESC enhancer starr_12749 Neighboring gene RIKEN cDNA 3110082J24 gene Neighboring gene kinesin family member 2C pseudogene Neighboring gene GRB2 associated regulator of MAPK1 subtype 2 Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha Neighboring gene STARR-positive B cell enhancer ABC_E8045

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. All kinesin superfamily protein, KIF, genes in mouse and human. Miki H, et al. Proc Natl Acad Sci U S A, 2001 Jun 19. PMID 11416179, Free PMC Article
  2. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • kinesin superfamily protein 2C pseudogene

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045694.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC112933, AK139799, CF173951
    Related
    ENSMUST00000197982.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    30297938..30302684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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