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Mb21d2 Mab-21 domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 239796, updated on 3-Apr-2024

Summary

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Official Symbol
Mb21d2provided by MGI
Official Full Name
Mab-21 domain containing 2provided by MGI
Primary source
MGI:MGI:1917028
See related
Ensembl:ENSMUSG00000051065 AllianceGenome:MGI:1917028
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A430031N04; 1600021P15Rik
Summary
Orthologous to human MB21D2 (Mab-21 domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E18 (RPKM 10.6), whole brain E14.5 (RPKM 9.5) and 27 other tissues See more
Orthologs
human all
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Genomic context

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Location:
16 B2; 16 19.71 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (28644928..28748802, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (28826176..28929712, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 12 Neighboring gene predicted gene, 46548 Neighboring gene STARR-seq mESC enhancer starr_40512 Neighboring gene STARR-seq mESC enhancer starr_40513 Neighboring gene STARR-seq mESC enhancer starr_40515 Neighboring gene STARR-seq mESC enhancer starr_40516 Neighboring gene predicted gene, 20018 Neighboring gene STARR-seq mESC enhancer starr_40518 Neighboring gene STARR-seq mESC enhancer starr_40520 Neighboring gene predicted gene 8253 Neighboring gene STARR-seq mESC enhancer starr_40521 Neighboring gene phospholipase A and acyltransferase 1 Neighboring gene ATPase type 13A5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. KIF14 negatively regulates Rap1a-Radil signaling during breast cancer progression. Ahmed SM, et al. J Cell Biol, 2012 Dec 10. PMID 23209302, Free PMC Article
  2. The TRIM9/TRIM67 neuronal interactome reveals novel activators of morphogenesis. Menon S, et al. Mol Biol Cell, 2021 Feb 15. PMID 33378226, Free PMC Article
  3. Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations. Munton RP, et al. Mol Cell Proteomics, 2007 Feb. PMID 17114649
  4. The central role of EED in the orchestration of polycomb group complexes. Cao Q, et al. Nat Commun, 2014. PMID 24457600, Free PMC Article
  5. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (5) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC103296

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nucleotidyltransferase MB21D2
Names
mab-21 domain-containing protein 2
protein MB21D2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001405899.1 → NP_001392828.1  nucleotidyltransferase MB21D2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC154807

  2. NM_001405900.1 → NP_001392829.1  nucleotidyltransferase MB21D2 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC154807

  3. NM_177718.4 → NP_808386.2  nucleotidyltransferase MB21D2 isoform 1

    See identical proteins and their annotated locations for NP_808386.2

    Status: VALIDATED

    Source sequence(s)
    AC154807
    Consensus CDS
    CCDS28093.1
    UniProtKB/Swiss-Prot
    Q5U4H4, Q8C525
    UniProtKB/TrEMBL
    D3Z742
    Related
    ENSMUSP00000097600.2, ENSMUST00000100023.3
    Conserved Domains (1) summary
    pfam03281
    Location:176 → 401
    Mab-21; Mab-21 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    28644928..28748802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006522117.1 → XP_006522180.1  nucleotidyltransferase MB21D2 isoform X3

    UniProtKB/Swiss-Prot
    Q5U4H4, Q8C525
    Conserved Domains (1) summary
    pfam03281
    Location:117 → 342
    Mab-21; Mab-21 protein
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8C525.1 GenPept UniProtKB/Swiss-Prot:Q8C525

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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