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Tlr11 toll-like receptor 11 [ Mus musculus (house mouse) ]

Gene ID: 239081, updated on 11-Apr-2024

Summary

Official Symbol
Tlr11provided by MGI
Official Full Name
toll-like receptor 11provided by MGI
Primary source
MGI:MGI:3045226
See related
Ensembl:ENSMUSG00000051969 AllianceGenome:MGI:3045226
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm287
Summary
Predicted to enable signaling receptor activity. Acts upstream of or within response to bacterium. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in spleen adult (RPKM 1.4), mammary gland adult (RPKM 1.0) and 11 other tissues See more
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Genomic context

See Tlr11 in Genome Data Viewer
Location:
14 C1; 14 26.07 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (50595371..50601120)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (50357914..50363663)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily M member 1 Neighboring gene olfactory receptor family 4 subfamily Q member 3 Neighboring gene olfactory receptor family 11 subfamily J member 4 Neighboring gene olfactory receptor 737, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • MGC129352, MGC129353

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
involved_in inflammatory response IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within innate immune response IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within response to bacterium IMP
Inferred from Mutant Phenotype
more info
 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in toll-like receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
toll-like receptor 11
Names
toll-like receptor 12
NP_991388.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205819.3NP_991388.2  toll-like receptor 11

    Status: VALIDATED

    Source sequence(s)
    AC135188, AI646605, AY510704
    Consensus CDS
    CCDS27012.2
    UniProtKB/Swiss-Prot
    Q6R5P0
    UniProtKB/TrEMBL
    V9GWT0
    Related
    ENSMUSP00000138814.2, ENSMUST00000185091.2
    Conserved Domains (4) summary
    cd00116
    Location:184427
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:224246
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13676
    Location:781861
    TIR_2; TIR domain
    pfam13855
    Location:366426
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    50595371..50601120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)