Spata31d1b spermatogenesis associated 31 subfamily D, member 1B [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Spata31d1bprovided by MGI
Official Full Name: spermatogenesis associated 31 subfamily D, member 1Bprovided by MGI
Primary source: MGI:MGI:3646080
See related: Ensembl:ENSMUSG00000091311 AllianceGenome:MGI:3646080
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Gm4934; EG238662; Fam75d1b
Summary: Orthologous to several human genes including SPATA31D1 (SPATA31 subfamily D member 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Restricted expression toward testis adult (RPKM 58.8) See more
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Genomic context

Location:: 13 B2; 13 31.87 cM

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	13	NC_000079.7 (59860098..59867103)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	13	NC_000079.6 (59712284..59719289)

Chromosome 13 - NC_000079.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein LOC238662

Names: family with sequence similarity 75, member D1B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001167593.1 → NP_001161065.1 uncharacterized protein LOC238662

Status: VALIDATED

Source sequence(s)

AC134869, AK133300

Consensus CDS

CCDS49285.1

UniProtKB/TrEMBL

E9QA57

Related

ENSMUSP00000130813.2, ENSMUST00000165133.3

Conserved Domains (2) summary

pfam14650
Location:402 → 774

FAM75; FAM75 family

pfam15371
Location:68 → 152

DUF4599; Domain of unknown function (DUF4599)