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Irf2bpl interferon regulatory factor 2 binding protein-like [ Mus musculus (house mouse) ]

Gene ID: 238330, updated on 5-Mar-2024

Summary

Official Symbol
Irf2bplprovided by MGI
Official Full Name
interferon regulatory factor 2 binding protein-likeprovided by MGI
Primary source
MGI:MGI:2442463
See related
Ensembl:ENSMUSG00000034168 AllianceGenome:MGI:2442463
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Eap1; 6430527G18Rik
Summary
Predicted to enable transcription corepressor activity and ubiquitin protein ligase activity. Predicted to be involved in development of secondary female sexual characteristics; nervous system development; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Orthologous to human IRF2BPL (interferon regulatory factor 2 binding protein like). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
12 D2; 12 41.06 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (86927477..86931588, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (86880703..86884814, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51955 Neighboring gene STARR-positive B cell enhancer ABC_E5344 Neighboring gene predicted gene, 53734 Neighboring gene ribosomal protein L21 pseudogene Neighboring gene STARR-seq mESC enhancer starr_32848 Neighboring gene STARR-seq mESC enhancer starr_32850 Neighboring gene STARR-seq mESC enhancer starr_32852 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:88233078-88233265 Neighboring gene STARR-positive B cell enhancer ABC_E7164 Neighboring gene STARR-seq mESC enhancer starr_32856 Neighboring gene predicted gene, 26698 Neighboring gene predicted gene, 53735 Neighboring gene STARR-seq mESC enhancer starr_32861 Neighboring gene STARR-seq mESC enhancer starr_32863 Neighboring gene STARR-seq mESC enhancer starr_32864

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription corepressor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
enables ubiquitin protein ligase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
probable E3 ubiquitin-protein ligase IRF2BPL
Names
enhanced at puberty protein 1
polyglutamine-containing protein
NP_665835.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145836.2NP_665835.1  probable E3 ubiquitin-protein ligase IRF2BPL

    See identical proteins and their annotated locations for NP_665835.1

    Status: VALIDATED

    Source sequence(s)
    AK173282
    Consensus CDS
    CCDS26068.1
    UniProtKB/Swiss-Prot
    Q3TBU9, Q3U483, Q3USE5, Q69Z84, Q8BUS1, Q8C011, Q8K3X4
    Related
    ENSMUSP00000041070.7, ENSMUST00000038422.8
    Conserved Domains (2) summary
    smart00184
    Location:694738
    RING; Ring finger
    pfam11261
    Location:1061
    IRF-2BP1_2; Interferon regulatory factor 2-binding protein zinc finger

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    86927477..86931588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)