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Mief2 mitochondrial elongation factor 2 [ Mus musculus (house mouse) ]

Gene ID: 237781, updated on 5-Mar-2024

Summary

Official Symbol
Mief2provided by MGI
Official Full Name
mitochondrial elongation factor 2provided by MGI
Primary source
MGI:MGI:2144199
See related
Ensembl:ENSMUSG00000018599 AllianceGenome:MGI:2144199
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm11; Smcr7
Summary
Involved in positive regulation of mitochondrial fission. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial outer membrane. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 49. Orthologous to human MIEF2 (mitochondrial elongation factor 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 15.6), ovary adult (RPKM 9.4) and 27 other tissues See more
Orthologs
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Genomic context

Location:
11 B2; 11 37.81 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (60619224..60623777)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (60728398..60732951)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_29656 Neighboring gene Uba52 pseudogene Neighboring gene LLGL1 scribble cell polarity complex component Neighboring gene flightless I actin binding protein Neighboring gene STARR-positive B cell enhancer ABC_E2991 Neighboring gene microRNA 5100 Neighboring gene STARR-seq mESC enhancer starr_29657 Neighboring gene predicted gene, 23341 Neighboring gene topoisomerase (DNA) III alpha Neighboring gene STARR-seq mESC enhancer starr_29659

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (2) 

General gene information

Markers

Clone Names

  • MGC113770

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in mitochondrion organization ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of mitochondrial fission IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of mitochondrial fission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of mitochondrial fission ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of mitochondrion organization ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrial outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial outer membrane ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mitochondrial dynamics protein MID49
Names
mitochondrial dynamic protein MID49
mitochondrial dynamic protein of 49 kDa homolog
mitochondrial dynamics protein of 49 kDa homolog
smith-Magenis syndrome chromosomal region candidate gene 7 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009927.2NP_001009927.1  mitochondrial dynamics protein MID49

    See identical proteins and their annotated locations for NP_001009927.1

    Status: VALIDATED

    Source sequence(s)
    BB871610, BC088984, BY234735
    Consensus CDS
    CCDS24796.1
    UniProtKB/Swiss-Prot
    Q5NCS9
    Related
    ENSMUSP00000018743.5, ENSMUST00000018743.5
    Conserved Domains (1) summary
    pfam03281
    Location:392439
    Mab-21; Mab-21 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    60619224..60623777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)