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Npffr1 neuropeptide FF receptor 1 [ Mus musculus (house mouse) ]

Gene ID: 237362, updated on 11-Apr-2024

Summary

Official Symbol
Npffr1provided by MGI
Official Full Name
neuropeptide FF receptor 1provided by MGI
Primary source
MGI:MGI:2685082
See related
Ensembl:ENSMUSG00000020090 AllianceGenome:MGI:2685082
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm236; NPFF1; Gpr147; NPFF1R; OT7T022
Summary
Predicted to enable G protein-coupled receptor activity and peptide binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in cilium. Predicted to be integral component of plasma membrane. Orthologous to human NPFFR1 (neuropeptide FF receptor 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

Location:
10 B4; 10 32.24 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (61430600..61465243)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (61595295..61629464)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 20 Neighboring gene predicted gene, 47593 Neighboring gene oligosaccharyltransferase complex subunit pseudogene Neighboring gene STARR-seq mESC enhancer starr_26850 Neighboring gene predicted gene 28447 Neighboring gene STARR-positive B cell enhancer ABC_E10613 Neighboring gene STARR-positive B cell enhancer ABC_E6861 Neighboring gene pyrophosphatase (inorganic) 1 Neighboring gene RIKEN cDNA 1700022H01 gene Neighboring gene STARR-positive B cell enhancer ABC_E9032

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (5) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables peptide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to hormone stimulus IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cilium IDA
Inferred from Direct Assay
more info
PubMed 
located_in cilium ISO
Inferred from Sequence Orthology
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
neuropeptide FF receptor 1
Names
G protein-coupled receptor 147
G-protein coupled receptor NPFF1R
RFamide-related peptide receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177511.2NP_001170982.1  neuropeptide FF receptor 1

    Status: VALIDATED

    Source sequence(s)
    AC124421
    Consensus CDS
    CCDS48574.1
    UniProtKB/TrEMBL
    E9Q468
    Related
    ENSMUSP00000020287.6, ENSMUST00000020287.8
    Conserved Domains (2) summary
    pfam00001
    Location:60331
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:54173
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    61430600..61465243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011243444.4XP_011241746.1  neuropeptide FF receptor 1 isoform X1

    Conserved Domains (2) summary
    cd14964
    Location:129
    7tm_GPCRs; TM helix 3 [structural motif]
    cl28897
    Location:1225
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily