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Cypt4 cysteine-rich perinuclear theca 4 [ Mus musculus (house mouse) ]

Gene ID: 235067, updated on 8-Feb-2024

Summary

Official Symbol
Cypt4provided by MGI
Official Full Name
cysteine-rich perinuclear theca 4provided by MGI
Primary source
MGI:MGI:1916573
See related
Ensembl:ENSMUSG00000047995 AllianceGenome:MGI:1916573
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ckt1r2; 1700009B20Rik
Summary
Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
9 A4; 9 10.25 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (24536481..24537124)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (24625185..24625828)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 10701 Neighboring gene predicted gene, 22380 Neighboring gene dpy-19 like C-mannosyltransferase 1 Neighboring gene predicted gene, 57533 Neighboring gene STARR-seq mESC enhancer starr_23585 Neighboring gene dpy-19 like 2 Neighboring gene STARR-seq mESC enhancer starr_23586 Neighboring gene STARR-seq mESC enhancer starr_23587 Neighboring gene STARR-seq mESC enhancer starr_23588 Neighboring gene T-box 20 Neighboring gene predicted gene, 29824

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cysteine-rich perinuclear theca 4
Names
basic protein CKT1R2
cysteine-rich perinuclear theca protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173412.2NP_775588.2  cysteine-rich perinuclear theca 4

    See identical proteins and their annotated locations for NP_775588.2

    Status: VALIDATED

    Source sequence(s)
    AC154463, BC060952, BX638772
    Consensus CDS
    CCDS22932.1
    UniProtKB/TrEMBL
    Q6P925, Q8CH21
    Related
    ENSMUSP00000054958.7, ENSMUST00000053956.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    24536481..24537124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)