Mrps35 mitochondrial ribosomal protein S35 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Mrps35provided by MGI
Official Full Name: mitochondrial ribosomal protein S35provided by MGI
Primary source: MGI:MGI:2385255
See related: Ensembl:ENSMUSG00000040112 AllianceGenome:MGI:2385255
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: MDSO23; MRPS28; MRP-S28
Summary: Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPS35 (mitochondrial ribosomal protein S35). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in bladder adult (RPKM 15.2), liver E14 (RPKM 14.3) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 6 G3; 6 77.7 cM

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	6	NC_000072.7 (146944270..146972399)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	6	NC_000072.6 (147042728..147070906)

Chromosome 6 - NC_000072.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

NoName (e-PCR)
- UniSTS:235579

D0M6Mit373 (e-PCR)
- UniSTS:130929

D6Mit373 (e-PCR), detects polymorphism
- UniSTS:130929

RH129064 (e-PCR)
- UniSTS:212372

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables structural constituent of ribosome	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mitochondrial translation	NAS Non-traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	NAS Non-traceable Author Statement more info	PubMed
part_of mitochondrial small ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info
part_of mitochondrial small ribosomal subunit	NAS Non-traceable Author Statement more info	PubMed
located_in mitochondrion	HDA more info	PubMed
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small ribosomal subunit protein mS35

Names: 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; mitochondrial ribosomal protein S34

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001411632.1 → NP_001398561.1 small ribosomal subunit protein mS35 isoform 2

Status: VALIDATED

Source sequence(s)

AC153575
NM_001411633.1 → NP_001398562.1 small ribosomal subunit protein mS35 isoform 3

Status: VALIDATED

Source sequence(s)

AC153575
NM_001411634.1 → NP_001398563.1 small ribosomal subunit protein mS35 isoform 4

Status: VALIDATED

Source sequence(s)

AC153575
NM_145573.3 → NP_663548.2 small ribosomal subunit protein mS35 isoform 1

See identical proteins and their annotated locations for NP_663548.2

Status: VALIDATED

Source sequence(s)

AC153575

Consensus CDS

CCDS51959.1

UniProtKB/Swiss-Prot

B2KFS5, Q8BJZ4, Q8VCG7

UniProtKB/TrEMBL

A0A0R4J0L6

Related

ENSMUSP00000048348.8, ENSMUST00000036111.10

Conserved Domains (1) summary

pfam10213
Location:162 → 248

MRP-S28; Mitochondrial ribosomal subunit protein