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Hcrtr1 hypocretin (orexin) receptor 1 [ Mus musculus (house mouse) ]

Gene ID: 230777, updated on 9-May-2024

Summary

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Official Symbol
Hcrtr1provided by MGI
Official Full Name
hypocretin (orexin) receptor 1provided by MGI
Primary source
MGI:MGI:2385650
See related
Ensembl:ENSMUSG00000028778 AllianceGenome:MGI:2385650
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ox1r; ox1-R; ox-1-R
Summary
Predicted to enable orexin receptor activity and peptide hormone binding activity. Acts upstream of or within positive regulation of ERK1 and ERK2 cascade. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including brain; genitourinary system; gut; immune system; and liver and biliary system. Orthologous to human HCRTR1 (hypocretin receptor 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in bladder adult (RPKM 6.3), stomach adult (RPKM 2.7) and 12 other tissues See more
Orthologs
human all
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Genomic context

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Location:
4 D2.2; 4 63.43 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (130024010..130033389, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (130130217..130139594, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene collagen, type XVI, alpha 1 Neighboring gene predicted gene, 46871 Neighboring gene STARR-positive B cell enhancer ABC_E1656 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:129785190-129785373 Neighboring gene predicted gene, 40258 Neighboring gene penta-EF hand domain containing 1 Neighboring gene predicted gene, 40259 Neighboring gene tubulointerstitial nephritis antigen-like 1 Neighboring gene predicted gene, 52490

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Orexin 1 Receptor Antagonism in the Basolateral Amygdala Shifts the Balance From Pro- to Antistress Signaling and Behavior. Yaeger JDW, et al. Biol Psychiatry, 2022 May 1. PMID 35279280, Free PMC Article
  2. Differential importance of nucleus accumbens Ox1Rs and AMPARs for female and male mouse binge alcohol drinking. Kwok C, et al. Sci Rep, 2021 Jan 8. PMID 33420199, Free PMC Article
  3. Decreased Orexin Receptor 1 mRNA Expression in the Locus Coeruleus in Both Tau Transgenic rTg4510 and Tau Knockout Mice and Accompanying Ascending Arousal System Tau Invasion in rTg4510. Keenan RJ, et al. J Alzheimers Dis, 2021. PMID 33361602
  4. Nucleus accumbens shell Orexin-1 receptors are not needed for single-bottle limited daily access alcohol intake in C57BL/6 mice. Lei K, et al. Alcohol, 2020 Dec. PMID 32987129, Free PMC Article
  5. Involvement of descending pain control system regulated by orexin receptor signaling in the induction of central post-stroke pain in mice. Matsuura W, et al. Eur J Pharmacol, 2020 May 5. PMID 32084419

See all (71) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. alpha-Synuclein Induced the Occurrence of RBD via Interaction with OX1R and Modulated Its Degradation.
    Title: α-Synuclein Induced the Occurrence of RBD via Interaction with OX1R and Modulated Its Degradation.
  2. Antagonization of OX1 Receptor Potentiates CB2 Receptor Function in Microglia from APPSw/Ind Mice Model.
    Title: Antagonization of OX(1) Receptor Potentiates CB(2) Receptor Function in Microglia from APP(Sw/Ind) Mice Model.
  3. The hypothalamic RFamide, QRFP, increases feeding and locomotor activity: The role of Gpr103 and orexin receptors.
    Title: The hypothalamic RFamide, QRFP, increases feeding and locomotor activity: The role of Gpr103 and orexin receptors.
  4. Orexin 1 Receptor Antagonism in the Basolateral Amygdala Shifts the Balance From Pro- to Antistress Signaling and Behavior.
    Title: Orexin 1 Receptor Antagonism in the Basolateral Amygdala Shifts the Balance From Pro- to Antistress Signaling and Behavior.
  5. Decreased Orexin Receptor 1 mRNA Expression in the Locus Coeruleus in Both Tau Transgenic rTg4510 and Tau Knockout Mice and Accompanying Ascending Arousal System Tau Invasion in rTg4510.
    Title: Decreased Orexin Receptor 1 mRNA Expression in the Locus Coeruleus in Both Tau Transgenic rTg4510 and Tau Knockout Mice and Accompanying Ascending Arousal System Tau Invasion in rTg4510.
  6. Orexin receptors 1 and 2 in serotonergic neurons differentially regulate peripheral glucose metabolism in obesity.
    Title: Orexin receptors 1 and 2 in serotonergic neurons differentially regulate peripheral glucose metabolism in obesity.
  7. Nucleus accumbens shell Orexin-1 receptors are not needed for single-bottle limited daily access alcohol intake in C57BL/6 mice.
    Title: Nucleus accumbens shell Orexin-1 receptors are not needed for single-bottle limited daily access alcohol intake in C57BL/6 mice.
  8. Differential importance of nucleus accumbens Ox1Rs and AMPARs for female and male mouse binge alcohol drinking.
    Title: Differential importance of nucleus accumbens Ox1Rs and AMPARs for female and male mouse binge alcohol drinking.
  9. Orexin 1 and 2 Receptors in the Prelimbic Cortex Modulate Threat Valuation.
    Title: Orexin 1 and 2 Receptors in the Prelimbic Cortex Modulate Threat Valuation.
  10. Involvement of descending pain control system regulated by orexin receptor signaling in the induction of central post-stroke pain in mice.
    Title: Involvement of descending pain control system regulated by orexin receptor signaling in the induction of central post-stroke pain in mice.
Submit: New GeneRIF Correction See all GeneRIFs (32)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (7)  1 citation
  • Endonuclease-mediated (3) 

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC141357

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables orexin receptor activity ISO
Inferred from Sequence Orthology
more info
  
enables peptide binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables peptide hormone binding ISO
Inferred from Sequence Orthology
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
  
involved_in cellular response to hormone stimulus IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in feeding behavior IEA
Inferred from Electronic Annotation
more info
  
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in neuropeptide signaling pathway ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within positive regulation of ERK1 and ERK2 cascade IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
orexin/Hypocretin receptor type 1
Names
hypocretin receptor type 1
orexin receptor type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163027.2 → NP_001156499.1  orexin/Hypocretin receptor type 1 isoform 1

    See identical proteins and their annotated locations for NP_001156499.1

    Status: VALIDATED

    Source sequence(s)
    AL606925
    Consensus CDS
    CCDS18707.1
    UniProtKB/Swiss-Prot
    P58307, Q0VDP5, Q3USS9, Q6VNS3, Q80T45
    Related
    ENSMUSP00000113198.3, ENSMUST00000120154.9
    Conserved Domains (1) summary
    cd15208
    Location:47 → 369
    7tmA_OXR; orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. NM_001305392.2 → NP_001292321.1  orexin/Hypocretin receptor type 1 isoform 2

    See identical proteins and their annotated locations for NP_001292321.1

    Status: VALIDATED

    Source sequence(s)
    AL606925
    UniProtKB/TrEMBL
    Q0VDP6
    Conserved Domains (2) summary
    cd14964
    Location:37 → 66
    7tm_GPCRs; TM helix 5 [structural motif]
    cl28897
    Location:1 → 194
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  3. NM_001357258.2 → NP_001344187.1  orexin/Hypocretin receptor type 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL606925
    UniProtKB/TrEMBL
    Q0VDP6
    Conserved Domains (2) summary
    cd14964
    Location:37 → 66
    7tm_GPCRs; TM helix 5 [structural motif]
    cl28897
    Location:1 → 194
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  4. NM_001426068.1 → NP_001412997.1  orexin/Hypocretin receptor type 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL606925
    UniProtKB/TrEMBL
    Q0VDP6

  5. NM_001426069.1 → NP_001412998.1  orexin/Hypocretin receptor type 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL606925
    UniProtKB/Swiss-Prot
    P58307, Q0VDP5, Q3USS9, Q6VNS3, Q80T45

  6. NM_198959.3 → NP_945197.2  orexin/Hypocretin receptor type 1 isoform 1

    See identical proteins and their annotated locations for NP_945197.2

    Status: VALIDATED

    Source sequence(s)
    AL606925
    Consensus CDS
    CCDS18707.1
    UniProtKB/Swiss-Prot
    P58307, Q0VDP5, Q3USS9, Q6VNS3, Q80T45
    Related
    ENSMUSP00000030562.7, ENSMUST00000030562.13
    Conserved Domains (1) summary
    cd15208
    Location:47 → 369
    7tmA_OXR; orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    130024010..130033389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164062.1 → XP_036019955.1  orexin/Hypocretin receptor type 1 isoform X2

    UniProtKB/TrEMBL
    Q0VDP6
    Conserved Domains (2) summary
    cd14964
    Location:37 → 66
    7tm_GPCRs; TM helix 5 [structural motif]
    cl28897
    Location:1 → 194
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_036164060.1 → XP_036019953.1  orexin/Hypocretin receptor type 1 isoform X1

    UniProtKB/Swiss-Prot
    P58307, Q0VDP5, Q3USS9, Q6VNS3, Q80T45
    Related
    ENSMUSP00000112630.2, ENSMUST00000119423.8
    Conserved Domains (1) summary
    cd15208
    Location:47 → 369
    7tmA_OXR; orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_017320157.3 → XP_017175646.1  orexin/Hypocretin receptor type 1 isoform X1

    UniProtKB/Swiss-Prot
    P58307, Q0VDP5, Q3USS9, Q6VNS3, Q80T45
    Conserved Domains (1) summary
    cd15208
    Location:47 → 369
    7tmA_OXR; orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P58307.3 GenPept UniProtKB/Swiss-Prot:P58307

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