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Gpr171 G protein-coupled receptor 171 [ Mus musculus (house mouse) ]

Gene ID: 229323, updated on 5-Mar-2024

Summary

Official Symbol
Gpr171provided by MGI
Official Full Name
G protein-coupled receptor 171provided by MGI
Primary source
MGI:MGI:2442043
See related
Ensembl:ENSMUSG00000050075 AllianceGenome:MGI:2442043
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H963; A630006E05; F730001G15Rik
Summary
Predicted to enable G protein-coupled purinergic nucleotide receptor activity. Acts upstream of or within negative regulation of myeloid cell differentiation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human GPR171 (G protein-coupled receptor 171). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in thymus adult (RPKM 4.5), spleen adult (RPKM 2.7) and 6 other tissues See more
Orthologs
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Genomic context

See Gpr171 in Genome Data Viewer
Location:
3 D; 3 28.94 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (59003869..59009242, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (59096448..59101821, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13, pseudogene 6 Neighboring gene predicted gene, 25572 Neighboring gene mediator complex subunit 12-like Neighboring gene STARR-positive B cell enhancer ABC_E6054 Neighboring gene STARR-seq mESC enhancer starr_07762 Neighboring gene STARR-seq mESC enhancer starr_07763 Neighboring gene RIKEN cDNA F630111L10 gene Neighboring gene purinergic receptor P2Y, G-protein coupled, 14 Neighboring gene STARR-seq mESC enhancer starr_07764 Neighboring gene STARR-seq mESC enhancer starr_07765 Neighboring gene predicted gene, 51434 Neighboring gene G protein-coupled receptor 87

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (3) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables G protein-coupled purinergic nucleotide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide binding IDA
Inferred from Direct Assay
more info
PubMed 
enables neuropeptide receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
G-protein coupled receptor 171
Names
probable G-protein coupled receptor 171

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173398.3NP_775574.1  G-protein coupled receptor 171

    See identical proteins and their annotated locations for NP_775574.1

    Status: VALIDATED

    Source sequence(s)
    AC115919
    Consensus CDS
    CCDS17370.1
    UniProtKB/Swiss-Prot
    Q8BG55, Q8BTN1, Q8BY85, Q8CIF3
    Related
    ENSMUSP00000082115.5, ENSMUST00000085040.5
    Conserved Domains (1) summary
    pfam00001
    Location:37285
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    59003869..59009242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)