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Trpm3 transient receptor potential cation channel, subfamily M, member 3 [ Mus musculus (house mouse) ]

Gene ID: 226025, updated on 11-Apr-2024

Summary

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Official Symbol
Trpm3provided by MGI
Official Full Name
transient receptor potential cation channel, subfamily M, member 3provided by MGI
Primary source
MGI:MGI:2443101
See related
Ensembl:ENSMUSG00000052387 AllianceGenome:MGI:2443101
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MLSN2; LTRPC3; 9330180E14; 6330504P12Rik; B930001P07Rik
Summary
Predicted to enable cation channel activity. Predicted to be involved in cation transmembrane transport. Predicted to act upstream of or within cation transport. Predicted to be integral component of plasma membrane. Is expressed in cochlea; liver; nervous system; and retina. Used to study cataract and microphthalmia. Orthologous to human TRPM3 (transient receptor potential cation channel subfamily M member 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in cerebellum adult (RPKM 5.1), genital fat pad adult (RPKM 2.9) and 7 other tissues See more
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Genomic context

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Location:
19 B; 19 16.05 cM
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (22114789..22972774)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (22137797..22995410)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45740 Neighboring gene cell migration inducing hyaluronidase 2 Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene Neighboring gene lactate dehydrogenase B, pseudogene Neighboring gene STARR-seq mESC enhancer starr_45741 Neighboring gene STARR-seq mESC enhancer starr_45742 Neighboring gene STARR-seq mESC enhancer starr_45744 Neighboring gene predicted gene, 22506 Neighboring gene ubiquitin-conjugating enzyme E2 D3-like Neighboring gene NSA2 ribosome biogenesis homolog, pseudogene 1 Neighboring gene predicted gene 27151 Neighboring gene predicted gene, 33649 Neighboring gene predicted gene, 54055 Neighboring gene STARR-seq mESC enhancer starr_45746 Neighboring gene microRNA 204 Neighboring gene RIKEN cDNA C330002G04 gene Neighboring gene STARR-seq mESC enhancer starr_45752 Neighboring gene STARR-seq mESC enhancer starr_45755 Neighboring gene STARR-seq mESC enhancer starr_45757 Neighboring gene STARR-seq mESC enhancer starr_45759 Neighboring gene RIKEN cDNA 2410080I02 gene Neighboring gene STARR-seq mESC enhancer starr_45760 Neighboring gene STARR-seq mESC enhancer starr_45763 Neighboring gene STARR-positive B cell enhancer ABC_E4273 Neighboring gene microRNA 1192 Neighboring gene Kruppel-like transcription factor 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. TRPM3 Is Expressed in Afferent Bladder Neurons and Is Upregulated during Bladder Inflammation. Vanneste M, et al. Int J Mol Sci, 2021 Dec 22. PMID 35008533, Free PMC Article
  2. TRPM3 Channels Play Roles in Heat Hypersensitivity and Spontaneous Pain after Nerve Injury. Su S, et al. J Neurosci, 2021 Mar 17. PMID 33478988, Free PMC Article
  3. The TRPM3 ion channel mediates nociception but not itch evoked by endogenous pruritogenic mediators. Kelemen B, et al. Biochem Pharmacol, 2021 Jan. PMID 33130130, Free PMC Article
  4. Upregulation of TRPM3 in nociceptors innervating inflamed tissue. Mulier M, et al. Elife, 2020 Sep 3. PMID 32880575, Free PMC Article
  5. The Impact of Steroid Activation of TRPM3 on Spontaneous Activity in the Developing Retina. Webster CM, et al. eNeuro, 2020 Mar/Apr. PMID 32238415, Free PMC Article

See all (64) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A Cataract-Causing Mutation in the TRPM3 Cation Channel Disrupts Calcium Dynamics in the Lens.
    Title: A Cataract-Causing Mutation in the TRPM3 Cation Channel Disrupts Calcium Dynamics in the Lens.
  2. TRPM3 as a novel target to alleviate acute oxaliplatin-induced peripheral neuropathic pain.
    Title: TRPM3 as a novel target to alleviate acute oxaliplatin-induced peripheral neuropathic pain.
  3. Vasoprotective effects of NOX4 are mediated via polymerase and transient receptor potential melastatin 2 cation channels in endothelial cells.
    Title: Vasoprotective effects of NOX4 are mediated via polymerase and transient receptor potential melastatin 2 cation channels in endothelial cells.
  4. Structural and functional analyses of a GPCR-inhibited ion channel TRPM3.
    Title: Structural and functional analyses of a GPCR-inhibited ion channel TRPM3.
  5. TRPM3 in the eye and in the nervous system - from new findings to novel mechanisms.
    Title: TRPM3 in the eye and in the nervous system - from new findings to novel mechanisms.
  6. TRPM3 Is Expressed in Afferent Bladder Neurons and Is Upregulated during Bladder Inflammation.
    Title: TRPM3 Is Expressed in Afferent Bladder Neurons and Is Upregulated during Bladder Inflammation.
  7. The Impact of Steroid Activation of TRPM3 on Spontaneous Activity in the Developing Retina.
    Title: The Impact of Steroid Activation of TRPM3 on Spontaneous Activity in the Developing Retina.
  8. Mutation of the TRPM3 cation channel underlies progressive cataract development and lens calcification associated with pro-fibrotic and immune cell responses.
    Title: Mutation of the TRPM3 cation channel underlies progressive cataract development and lens calcification associated with pro-fibrotic and immune cell responses.
  9. TRPM3 Channels Play Roles in Heat Hypersensitivity and Spontaneous Pain after Nerve Injury.
    Title: TRPM3 Channels Play Roles in Heat Hypersensitivity and Spontaneous Pain after Nerve Injury.
  10. Control of Insulin Release by Transient Receptor Potential Melastatin 3 (TRPM3) Ion Channels.
    Title: Control of Insulin Release by Transient Receptor Potential Melastatin 3 (TRPM3) Ion Channels.
Submit: New GeneRIF Correction See all GeneRIFs (28)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (3)  1 citation

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium channel activity ISO
Inferred from Sequence Orthology
more info
  
enables monoatomic cation channel activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables monoatomic cation channel activity ISO
Inferred from Sequence Orthology
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport ISO
Inferred from Sequence Orthology
more info
  
involved_in metal ion transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in monoatomic cation transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within monoatomic cation transport ISO
Inferred from Sequence Orthology
more info
 PubMed 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transient receptor potential cation channel subfamily M member 3
Names
melastatin 2
transient receptor potential melastatin 3 beta 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035239.3 → NP_001030316.1  transient receptor potential cation channel subfamily M member 3 isoform a

    See identical proteins and their annotated locations for NP_001030316.1

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC132389, AC140411, AC164427
    Consensus CDS
    CCDS29702.1
    UniProtKB/TrEMBL
    Q5F4T0, Q69ZE8
    Related
    ENSMUSP00000157909.2, ENSMUST00000237820.2
    Conserved Domains (1) summary
    pfam16519
    Location:1233 → 1284
    TRPM_tetra; Tetramerization domain of TRPM

  2. NM_001035240.3 → NP_001030317.1  transient receptor potential cation channel subfamily M member 3 isoform b

    See identical proteins and their annotated locations for NP_001030317.1

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC132389, AC140411, AC164427
    Consensus CDS
    CCDS29703.1
    UniProtKB/TrEMBL
    Q5F4S9, Q69ZE8
    Related
    ENSMUSP00000084857.5, ENSMUST00000087576.12
    Conserved Domains (1) summary
    pfam16519
    Location:1233 → 1284
    TRPM_tetra; Tetramerization domain of TRPM

  3. NM_001035241.3 → NP_001030318.1  transient receptor potential cation channel subfamily M member 3 isoform c

    See identical proteins and their annotated locations for NP_001030318.1

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC132389, AC140411, AC164427
    Consensus CDS
    CCDS29704.1
    UniProtKB/TrEMBL
    Q5F4S8, Q69ZE8
    Related
    ENSMUSP00000074328.6, ENSMUST00000074770.13
    Conserved Domains (1) summary
    pfam16519
    Location:1223 → 1274
    TRPM_tetra; Tetramerization domain of TRPM

  4. NM_001035242.2 → NP_001030319.1  transient receptor potential cation channel subfamily M member 3 isoform d

    See identical proteins and their annotated locations for NP_001030319.1

    Status: VALIDATED

    Source sequence(s)
    AC132389, AC140411, AK173218, BB467120
    Consensus CDS
    CCDS89354.1
    UniProtKB/TrEMBL
    Q5F4S7, Q69ZE8
    Related
    ENSMUSP00000157607.2, ENSMUST00000237357.2
    Conserved Domains (1) summary
    pfam16519
    Location:1221 → 1272
    TRPM_tetra; Tetramerization domain of TRPM

  5. NM_001035243.3 → NP_001030320.1  transient receptor potential cation channel subfamily M member 3 isoform e

    See identical proteins and their annotated locations for NP_001030320.1

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC132389, AC140411, AC164427
    Consensus CDS
    CCDS89355.1
    UniProtKB/TrEMBL
    Q5F4S6, Q69ZE8
    Related
    ENSMUSP00000157673.2, ENSMUST00000236312.2
    Conserved Domains (1) summary
    pfam16519
    Location:1211 → 1262
    TRPM_tetra; Tetramerization domain of TRPM

  6. NM_001035244.2 → NP_001030321.1  transient receptor potential cation channel subfamily M member 3 isoform g

    Status: VALIDATED

    Source sequence(s)
    AC164427, AK046908, AK051867, AK085182
    Consensus CDS
    CCDS37935.1
    UniProtKB/TrEMBL
    E9PUC8
    Related
    ENSMUSP00000097160.3, ENSMUST00000099564.10
    Conserved Domains (1) summary
    cl26777
    Location:713 → 869
    TRP_2; Transient receptor ion channel II

  7. NM_001035245.2 → NP_001030322.1  transient receptor potential cation channel subfamily M member 3 isoform h

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC164427, AK082141, AK085182
    Consensus CDS
    CCDS50404.1
    UniProtKB/TrEMBL
    D3Z539
    Related
    ENSMUSP00000097162.4, ENSMUST00000099566.5
    Conserved Domains (1) summary
    pfam18139
    Location:1 → 230
    LSDAT_euk; SLOG in TRPM

  8. NM_001035246.2 → NP_001030323.1  transient receptor potential cation channel subfamily M member 3 isoform i

    See identical proteins and their annotated locations for NP_001030323.1

    Status: VALIDATED

    Source sequence(s)
    AC164427, AK044533, AK085182
    Related
    ENSMUST00000236009.2
    Conserved Domains (1) summary
    pfam18139
    Location:1 → 255
    LSDAT_euk; SLOG in TRPM

  9. NM_001362487.1 → NP_001349416.1  transient receptor potential cation channel subfamily M member 3 isoform j

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ1, J9SUA7
    Conserved Domains (2) summary
    pfam16519
    Location:1256 → 1307
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:906 → 1224
    TRP_2; Transient receptor ion channel II

  10. NM_001362488.1 → NP_001349417.1  transient receptor potential cation channel subfamily M member 3 isoform k

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ1, J9SQF8
    Conserved Domains (2) summary
    pfam16519
    Location:1246 → 1297
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:896 → 1214
    TRP_2; Transient receptor ion channel II

  11. NM_001362489.1 → NP_001349418.1  transient receptor potential cation channel subfamily M member 3 isoform l

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ1, J9SQF3
    Conserved Domains (2) summary
    pfam16519
    Location:1244 → 1295
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:894 → 1212
    TRP_2; Transient receptor ion channel II

  12. NM_001362490.1 → NP_001349419.1  transient receptor potential cation channel subfamily M member 3 isoform m

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Consensus CDS
    CCDS89358.1
    UniProtKB/TrEMBL
    F4YJP9, J9S314
    Related
    ENSMUSP00000158045.2, ENSMUST00000235522.2
    Conserved Domains (2) summary
    pfam16519
    Location:1243 → 1294
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:881 → 1211
    TRP_2; Transient receptor ion channel II

  13. NM_001362491.1 → NP_001349420.1  transient receptor potential cation channel subfamily M member 3 isoform n

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ0, F6M2J8
    Conserved Domains (2) summary
    pfam16519
    Location:1231 → 1282
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:881 → 1199
    TRP_2; Transient receptor ion channel II

  14. NM_001362496.1 → NP_001349425.1  transient receptor potential cation channel subfamily M member 3 isoform o

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC132389, AC164427
    Consensus CDS
    CCDS89362.1
    UniProtKB/TrEMBL
    F7CJ77, Q3UQF1
    Related
    ENSMUSP00000097164.4, ENSMUST00000099569.10
    Conserved Domains (2) summary
    pfam16519
    Location:1091 → 1142
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:741 → 1059
    TRP_2; Transient receptor ion channel II

  15. NM_001362497.1 → NP_001349426.1  transient receptor potential cation channel subfamily M member 3 isoform p

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Conserved Domains (3) summary
    pfam16519
    Location:424 → 475
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:394 → 503
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:74 → 392
    TRP_2; Transient receptor ion channel II

  16. NM_001362498.1 → NP_001349427.1  transient receptor potential cation channel subfamily M member 3 isoform q

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ2, J9T334
    Conserved Domains (2) summary
    pfam16519
    Location:1213 → 1264
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:863 → 1181
    TRP_2; Transient receptor ion channel II

  17. NM_001362499.1 → NP_001349428.1  transient receptor potential cation channel subfamily M member 3 isoform r

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ1, J9T345
    Conserved Domains (2) summary
    pfam16519
    Location:1228 → 1279
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:878 → 1196
    TRP_2; Transient receptor ion channel II

  18. NM_001362500.1 → NP_001349429.1  transient receptor potential cation channel subfamily M member 3 isoform s

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Consensus CDS
    CCDS89359.1
    UniProtKB/TrEMBL
    F4YJQ0, J9T120
    Related
    ENSMUSP00000157511.2, ENSMUST00000236372.2
    Conserved Domains (2) summary
    pfam16519
    Location:1204 → 1255
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:748 → 1172
    TRP_2; Transient receptor ion channel II

  19. NM_001362501.1 → NP_001349430.1  transient receptor potential cation channel subfamily M member 3 isoform t

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ1, J9S305
    Conserved Domains (2) summary
    pfam16519
    Location:1234 → 1285
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:884 → 1202
    TRP_2; Transient receptor ion channel II

  20. NM_001362502.1 → NP_001349431.1  transient receptor potential cation channel subfamily M member 3 isoform u

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJP9, J9SQE7
    Conserved Domains (2) summary
    pfam16519
    Location:1231 → 1282
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:869 → 1199
    TRP_2; Transient receptor ion channel II

  21. NM_001362503.1 → NP_001349432.1  transient receptor potential cation channel subfamily M member 3 isoform v

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJQ0, J9T143
    Conserved Domains (2) summary
    pfam16519
    Location:1221 → 1272
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:871 → 1189
    TRP_2; Transient receptor ion channel II

  22. NM_001362504.1 → NP_001349433.1  transient receptor potential cation channel subfamily M member 3 isoform w

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    UniProtKB/TrEMBL
    F4YJP8, J9S2Y6
    Conserved Domains (2) summary
    pfam16519
    Location:1219 → 1270
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:869 → 1187
    TRP_2; Transient receptor ion channel II

  23. NM_001362505.1 → NP_001349434.1  transient receptor potential cation channel subfamily M member 3 isoform p

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Conserved Domains (3) summary
    pfam16519
    Location:424 → 475
    TRPM_tetra; Tetramerisation domain of TRPM
    cl25602
    Location:394 → 503
    DUF3552; Domain of unknown function (DUF3552)
    cl26777
    Location:74 → 392
    TRP_2; Transient receptor ion channel II

  24. NM_001362506.1 → NP_001349435.1  transient receptor potential cation channel subfamily M member 3 isoform y

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Consensus CDS
    CCDS89357.1
    UniProtKB/TrEMBL
    F4YJQ2, J9S2Z5
    Related
    ENSMUSP00000157646.2, ENSMUST00000238066.2
    Conserved Domains (2) summary
    pfam16519
    Location:1201 → 1252
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:851 → 1169
    TRP_2; Transient receptor ion channel II

  25. NM_001362507.1 → NP_001349436.1  transient receptor potential cation channel subfamily M member 3 isoform z

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Consensus CDS
    CCDS89356.1
    UniProtKB/TrEMBL
    F4YJQ2, J9T153
    Related
    ENSMUSP00000158494.2, ENSMUST00000235780.2
    Conserved Domains (2) summary
    pfam16519
    Location:1203 → 1254
    TRPM_tetra; Tetramerisation domain of TRPM
    cl26777
    Location:853 → 1171
    TRP_2; Transient receptor ion channel II

  26. NM_001362508.1 → NP_001349437.1  transient receptor potential cation channel subfamily M member 3 isoform aa

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC132389
    Conserved Domains (2) summary
    TIGR00870
    Location:18 → 265
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:293 → 347
    TRPM_tetra; Tetramerisation domain of TRPM

  27. NM_001362511.1 → NP_001349440.1  transient receptor potential cation channel subfamily M member 3 isoform bb

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC164427, AK052064
    Consensus CDS
    CCDS89361.1
    UniProtKB/TrEMBL
    A0A494BA79
    Related
    ENSMUSP00000157917.2, ENSMUST00000235712.2

  28. NM_001362512.1 → NP_001349441.1  transient receptor potential cation channel subfamily M member 3 isoform cc

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC164427, AK161909
    Conserved Domains (1) summary
    pfam18139
    Location:1 → 255
    LSDAT_euk; SLOG in TRPM

  29. NM_001362513.1 → NP_001349442.1  transient receptor potential cation channel subfamily M member 3 issform dd

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC164427, AK051934
    Conserved Domains (1) summary
    pfam18139
    Location:1 → 258
    LSDAT_euk; SLOG in TRPM

  30. NM_177341.5 → NP_796315.2  transient receptor potential cation channel subfamily M member 3 isoform f

    See identical proteins and their annotated locations for NP_796315.2

    Status: VALIDATED

    Source sequence(s)
    AC123066, AC124513, AC132389, AC164427
    Consensus CDS
    CCDS29705.1
    UniProtKB/TrEMBL
    B2RUS0
    Related
    ENSMUSP00000042184.7, ENSMUST00000037901.14
    Conserved Domains (3) summary
    TIGR00870
    Location:881 → 1199
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1227 → 1282
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:153 → 418
    LSDAT_euk; SLOG in TRPM

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    22114789..22972774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006526954.5 → XP_006527017.1  transient receptor potential cation channel subfamily M member 3 isoform X1

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:908 → 1238
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1266 → 1321
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  2. XM_006526979.5 → XP_006527042.1  transient receptor potential cation channel subfamily M member 3 isoform X14

    Conserved Domains (3) summary
    TIGR00870
    Location:908 → 1238
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1266 → 1321
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  3. XM_006526957.5 → XP_006527020.1  transient receptor potential cation channel subfamily M member 3 isoform X4

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:908 → 1226
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1254 → 1309
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  4. XM_011247233.4 → XP_011245535.1  transient receptor potential cation channel subfamily M member 3 isoform X15

    Conserved Domains (3) summary
    TIGR00870
    Location:908 → 1226
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1254 → 1309
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  5. XM_006526956.5 → XP_006527019.1  transient receptor potential cation channel subfamily M member 3 isoform X3

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:898 → 1228
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1256 → 1311
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  6. XM_017318155.3 → XP_017173644.1  transient receptor potential cation channel subfamily M member 3 isoform X6

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:898 → 1216
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1244 → 1299
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  7. XM_006526958.5 → XP_006527021.1  transient receptor potential cation channel subfamily M member 3 isoform X5

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:896 → 1226
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1254 → 1309
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  8. XM_006526961.5 → XP_006527024.1  transient receptor potential cation channel subfamily M member 3 isoform X7

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:896 → 1214
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1242 → 1297
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  9. XM_006526966.5 → XP_006527029.1  transient receptor potential cation channel subfamily M member 3 isoform X9

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:886 → 1204
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1232 → 1287
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 445
    LSDAT_euk; SLOG in TRPM

  10. XM_006526963.5 → XP_006527026.1  transient receptor potential cation channel subfamily M member 3 isoform X8

    UniProtKB/TrEMBL
    Q69ZE8
    Conserved Domains (3) summary
    TIGR00870
    Location:883 → 1213
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1241 → 1296
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:155 → 420
    LSDAT_euk; SLOG in TRPM

  11. XM_030250889.2 → XP_030106749.1  transient receptor potential cation channel subfamily M member 3 isoform X18

    UniProtKB/TrEMBL
    Q8BJE6
    Conserved Domains (1) summary
    pfam18139
    Location:155 → 410
    LSDAT_euk; SLOG in TRPM

  12. XM_017318158.2 → XP_017173647.1  transient receptor potential cation channel subfamily M member 3 isoform X20

    UniProtKB/TrEMBL
    Q8BJE6
    Conserved Domains (1) summary
    pfam18139
    Location:155 → 385
    LSDAT_euk; SLOG in TRPM

  13. XM_030250888.2 → XP_030106748.1  transient receptor potential cation channel subfamily M member 3 isoform X17

    UniProtKB/TrEMBL
    Q8BKI1
    Conserved Domains (1) summary
    pfam18139
    Location:155 → 413
    LSDAT_euk; SLOG in TRPM

  14. XM_036161556.1 → XP_036017449.1  transient receptor potential cation channel subfamily M member 3 isoform X19

    UniProtKB/TrEMBL
    Q8BKI1
    Conserved Domains (1) summary
    pfam18139
    Location:155 → 388
    LSDAT_euk; SLOG in TRPM

  15. XM_036161554.1 → XP_036017447.1  transient receptor potential cation channel subfamily M member 3 isoform X11

    UniProtKB/TrEMBL
    F4YJP9
    Conserved Domains (3) summary
    TIGR00870
    Location:871 → 1201
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1229 → 1283
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:153 → 418
    LSDAT_euk; SLOG in TRPM

  16. XM_006526974.5 → XP_006527037.1  transient receptor potential cation channel subfamily M member 3 isoform X10

    See identical proteins and their annotated locations for XP_006527037.1

    UniProtKB/TrEMBL
    F4YJP8, J9SVL3
    Related
    ENSMUSP00000157503.2, ENSMUST00000236804.2
    Conserved Domains (3) summary
    TIGR00870
    Location:859 → 1177
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1205 → 1260
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:153 → 418
    LSDAT_euk; SLOG in TRPM

  17. XM_006526955.5 → XP_006527018.1  transient receptor potential cation channel subfamily M member 3 isoform X2

    UniProtKB/TrEMBL
    F4YJQ1
    Conserved Domains (3) summary
    TIGR00870
    Location:906 → 1236
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1264 → 1319
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:153 → 443
    LSDAT_euk; SLOG in TRPM

  18. XM_036161557.1 → XP_036017450.1  transient receptor potential cation channel subfamily M member 3 isoform X21

    UniProtKB/TrEMBL
    Q8BJE6
    Conserved Domains (1) summary
    pfam18139
    Location:153 → 383
    LSDAT_euk; SLOG in TRPM

  19. XM_006526978.4 → XP_006527041.1  transient receptor potential cation channel subfamily M member 3 isoform X13

    UniProtKB/TrEMBL
    Q3UQF1
    Conserved Domains (3) summary
    TIGR00870
    Location:728 → 1058
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1086 → 1141
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:1 → 265
    LSDAT_euk; SLOG in TRPM

  20. XM_036161558.1 → XP_036017451.1  transient receptor potential cation channel subfamily M member 3 isoform X22

    Conserved Domains (1) summary
    pfam18139
    Location:1 → 233
    LSDAT_euk; SLOG in TRPM

  21. XM_006526975.4 → XP_006527038.1  transient receptor potential cation channel subfamily M member 3 isoform X12

    See identical proteins and their annotated locations for XP_006527038.1

    UniProtKB/TrEMBL
    Q3UQF1
    Conserved Domains (3) summary
    TIGR00870
    Location:753 → 1083
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1111 → 1166
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:1 → 290
    LSDAT_euk; SLOG in TRPM

  22. XM_006526976.5 → XP_006527039.1  transient receptor potential cation channel subfamily M member 3 isoform X12

    See identical proteins and their annotated locations for XP_006527039.1

    UniProtKB/TrEMBL
    Q3UQF1
    Conserved Domains (3) summary
    TIGR00870
    Location:753 → 1083
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:1111 → 1166
    TRPM_tetra; Tetramerisation domain of TRPM
    pfam18139
    Location:1 → 290
    LSDAT_euk; SLOG in TRPM

  23. XM_036161555.1 → XP_036017448.1  transient receptor potential cation channel subfamily M member 3 isoform X16

    Conserved Domains (2) summary
    TIGR00870
    Location:18 → 265
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:293 → 347
    TRPM_tetra; Tetramerisation domain of TRPM

  24. XM_030250887.1 → XP_030106747.1  transient receptor potential cation channel subfamily M member 3 isoform X16

    Conserved Domains (2) summary
    TIGR00870
    Location:18 → 265
    trp; transient-receptor-potential calcium channel protein
    pfam16519
    Location:293 → 347
    TRPM_tetra; Tetramerisation domain of TRPM

RNA

  1. XR_003952780.2 RNA Sequence

  2. XR_003952781.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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