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Hrh4 histamine receptor H4 [ Mus musculus (house mouse) ]

Gene ID: 225192, updated on 11-Apr-2024

Summary

Official Symbol
Hrh4provided by MGI
Official Full Name
histamine receptor H4provided by MGI
Primary source
MGI:MGI:2429635
See related
Ensembl:ENSMUSG00000037346 AllianceGenome:MGI:2429635
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H4; H4R; BG26; HH4R; AXOR35; GPRv53; GPCR105
Summary
Enables histamine receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; chemical synaptic transmission; and inflammatory response. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Located in membrane. Orthologous to human HRH4 (histamine receptor H4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 1.0) and spleen adult (RPKM 0.1) See more
Orthologs
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Genomic context

See Hrh4 in Genome Data Viewer
Location:
18 A1; 18 6.88 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (13140039..13156758)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (13006982..13023701)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein-like 1A Neighboring gene ribosomal protein S8 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E9448 Neighboring gene impact, RWD domain protein Neighboring gene ribosomal protein SA pseudogene Neighboring gene predicted gene, 36563

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (4) 

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC130500

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled acetylcholine receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables G protein-coupled serotonin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables histamine receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables histamine receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in dendrite IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IC
Inferred by Curator
more info
PubMed 
is_active_in synapse IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153087.2NP_694727.1  histamine H4 receptor

    See identical proteins and their annotated locations for NP_694727.1

    Status: VALIDATED

    Source sequence(s)
    AC131672
    Consensus CDS
    CCDS29069.1
    UniProtKB/Swiss-Prot
    Q91ZY2
    Related
    ENSMUSP00000041061.3, ENSMUST00000041676.3
    Conserved Domains (1) summary
    pfam00001
    Location:32360
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    13140039..13156758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317874.1XP_017173363.1  histamine H4 receptor isoform X2

    UniProtKB/TrEMBL
    B2ZGH2
    Related
    ENSMUSP00000157130.2, ENSMUST00000234565.2
    Conserved Domains (2) summary
    cd14964
    Location:1842
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:16129
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  2. XM_006525817.2XP_006525880.1  histamine H4 receptor isoform X1

    See identical proteins and their annotated locations for XP_006525880.1

    UniProtKB/TrEMBL
    Q2M2N7
    Conserved Domains (2) summary
    cd14964
    Location:521
    7tm_GPCRs; TM helix 4 [structural motif]
    cl28897
    Location:1247
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily