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Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 [ Mus musculus (house mouse) ]

Gene ID: 224697, updated on 9-May-2024

Summary

Official Symbol
Adamts10provided by MGI
Official Full Name
ADAM metallopeptidase with thrombospondin type 1 motif 10provided by MGI
Primary source
MGI:MGI:2449112
See related
Ensembl:ENSMUSG00000024299 AllianceGenome:MGI:2449112
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Znmp; Adam-ts10; Adamts-10; 9430006O18
Summary
This gene encodes a member of "a disintegrin and metalloproteinase with thrombospondin motifs" (ADAMTS) family of multi-domain matrix-associated metalloendopeptidases that have diverse roles in tissue morphogenesis and pathophysiological remodeling, in inflammation and in vascular biology. The encoded preproprotein undergoes proteolytic processing to generate a functional, zinc-dependent metallopeptidase enzyme. [provided by RefSeq, Jul 2016]
Expression
Broad expression in ovary adult (RPKM 71.3), lung adult (RPKM 70.3) and 24 other tissues See more
Orthologs
NEW
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Try the new Transcript table

Genomic context

Location:
17 B1; 17 17.98 cM
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (33742620..33772756)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (33523646..33553782)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene actin-like 9 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:33621106-33621293 Neighboring gene NFIL3 like basic leucine zipper Neighboring gene STARR-seq mESC enhancer starr_42406 Neighboring gene myosin IF Neighboring gene STARR-seq mESC enhancer starr_42407 Neighboring gene STARR-seq mESC enhancer starr_42408 Neighboring gene zinc finger protein 414

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Clone Names

  • MGC118623

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in extracellular matrix organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in proteolysis IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in microfibril ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 10
Names
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 10
zinc metalloendopeptidase

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001329143.1NP_001316072.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 2

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Conserved Domains (6) summary
    smart00209
    Location:151203
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:307419
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:671703
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:70138
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:549603
    TSP1_ADAMTS; Thrombospondin type 1 domain
    cl00064
    Location:155
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
  2. NM_001329147.1NP_001316076.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 2

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Conserved Domains (6) summary
    smart00209
    Location:151203
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:307419
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:671703
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:70138
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:549603
    TSP1_ADAMTS; Thrombospondin type 1 domain
    cl00064
    Location:155
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
  3. NM_001329151.1NP_001316080.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 3

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Conserved Domains (5) summary
    PHA02682
    Location:394529
    PHA02682; ORF080 virion core protein; Provisional
    smart00209
    Location:74126
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:230342
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:594626
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:861
    ADAM_CR_2; ADAM cysteine-rich domain
  4. NM_001329152.1NP_001316081.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 3

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Conserved Domains (5) summary
    PHA02682
    Location:394529
    PHA02682; ORF080 virion core protein; Provisional
    smart00209
    Location:74126
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:230342
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:594626
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:861
    ADAM_CR_2; ADAM cysteine-rich domain
  5. NM_001329153.1NP_001316082.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 4

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Conserved Domains (4) summary
    smart00209
    Location:72124
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:228340
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:592624
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:470524
    TSP1_ADAMTS; Thrombospondin type 1 domain
  6. NM_001329154.1NP_001316083.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 4

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Conserved Domains (4) summary
    smart00209
    Location:72124
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:228340
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:592624
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:470524
    TSP1_ADAMTS; Thrombospondin type 1 domain
  7. NM_001329202.1NP_001316131.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 4

    Status: REVIEWED

    Source sequence(s)
    AK169468, BC056427, CT030734
    Conserved Domains (4) summary
    smart00209
    Location:72124
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:228340
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:592624
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:470524
    TSP1_ADAMTS; Thrombospondin type 1 domain
  8. NM_001329203.1NP_001316132.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 5

    Status: REVIEWED

    Source sequence(s)
    AK169468, CT030734
  9. NM_001425316.1NP_001412245.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 3

    Status: REVIEWED

    Source sequence(s)
    CT030734
  10. NM_001425317.1NP_001412246.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 4

    Status: REVIEWED

    Source sequence(s)
    CT030734
  11. NM_001425318.1NP_001412247.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 4

    Status: REVIEWED

    Source sequence(s)
    CT030734
  12. NM_172619.4NP_766207.2  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform 1 preproprotein

    See identical proteins and their annotated locations for NP_766207.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the longest protein (isoform 1).
    Source sequence(s)
    AK076334, AK169468, BQ571453, CT030734
    Consensus CDS
    CCDS37566.1
    UniProtKB/Swiss-Prot
    P58459, Q497H1, Q78TI1, Q8CG28
    Related
    ENSMUSP00000084905.7, ENSMUST00000087623.13
    Conserved Domains (6) summary
    smart00209
    Location:550602
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:239454
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01421
    Location:239457
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:64179
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:706818
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:10701102
    PLAC; PLAC (protease and lacunin) domain

RNA

  1. NR_137626.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Related
    ENSMUST00000173013.8
  2. NR_137627.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Related
    ENSMUST00000173241.8
  3. NR_137628.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734
    Related
    ENSMUST00000173931.8
  4. NR_137629.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AK042525, CT030734

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    33742620..33772756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317411.3XP_017172900.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X1

    Conserved Domains (7) summary
    PHA02682
    Location:804939
    PHA02682; ORF080 virion core protein; Provisional
    smart00209
    Location:484536
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:173388
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01562
    Location:40114
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:640752
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:10041036
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:403471
    ADAM_CR_2; ADAM cysteine-rich domain
  2. XM_017317418.2XP_017172907.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X4

    Conserved Domains (5) summary
    PHA02682
    Location:394529
    PHA02682; ORF080 virion core protein; Provisional
    smart00209
    Location:74126
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:230342
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:594626
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:861
    ADAM_CR_2; ADAM cysteine-rich domain
  3. XM_017317412.3XP_017172901.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X2

    Conserved Domains (6) summary
    smart00209
    Location:301353
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:1205
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:457569
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:821853
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:220288
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:699753
    TSP1_ADAMTS; Thrombospondin type 1 domain
  4. XM_036160532.1XP_036016425.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X5

    Conserved Domains (4) summary
    smart00209
    Location:72124
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:228340
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:592624
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:470524
    TSP1_ADAMTS; Thrombospondin type 1 domain
  5. XM_036160531.1XP_036016424.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X3

    Conserved Domains (6) summary
    smart00209
    Location:151203
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:307419
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:671703
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:70138
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:549603
    TSP1_ADAMTS; Thrombospondin type 1 domain
    cl00064
    Location:155
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
  6. XM_017317428.2XP_017172917.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X5

    Conserved Domains (4) summary
    smart00209
    Location:72124
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:228340
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:592624
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:470524
    TSP1_ADAMTS; Thrombospondin type 1 domain
  7. XM_030249704.2XP_030105564.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X4

    Conserved Domains (5) summary
    PHA02682
    Location:394529
    PHA02682; ORF080 virion core protein; Provisional
    smart00209
    Location:74126
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:230342
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:594626
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:861
    ADAM_CR_2; ADAM cysteine-rich domain
  8. XM_036160530.1XP_036016423.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X2

    Conserved Domains (6) summary
    smart00209
    Location:301353
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:1205
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:457569
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:821853
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:220288
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:699753
    TSP1_ADAMTS; Thrombospondin type 1 domain
  9. XM_017317424.2XP_017172913.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X5

    Related
    ENSMUST00000174104.8
    Conserved Domains (4) summary
    smart00209
    Location:72124
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:228340
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:592624
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:470524
    TSP1_ADAMTS; Thrombospondin type 1 domain
  10. XM_030249703.2XP_030105563.1  A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X4

    Conserved Domains (5) summary
    PHA02682
    Location:394529
    PHA02682; ORF080 virion core protein; Provisional
    smart00209
    Location:74126
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:230342
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:594626
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:861
    ADAM_CR_2; ADAM cysteine-rich domain

RNA

  1. XR_004939515.1 RNA Sequence

  2. XR_001782065.3 RNA Sequence

    Related
    ENSMUST00000173030.8
  3. XR_003952109.1 RNA Sequence