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Map3k7cl Map3k7 C-terminal like [ Mus musculus (house mouse) ]

Gene ID: 224419, updated on 5-Mar-2024

Summary

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Official Symbol
Map3k7clprovided by MGI
Official Full Name
Map3k7 C-terminal likeprovided by MGI
Primary source
MGI:MGI:2446584
See related
Ensembl:ENSMUSG00000025610 AllianceGenome:MGI:2446584
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ORF63; Tak1l; C21orf7
Summary
Is expressed in several structures, including alimentary system; cardiovascular system; genitourinary system; limb; and nervous system. Orthologous to human MAP3K7CL (MAP3K7 C-terminal like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 11.5), ovary adult (RPKM 2.1) and 7 other tissues See more
Orthologs
human all
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Genomic context

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See Map3k7cl in Genome Data Viewer
Location:
16 C3.3; 16 49.58 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (87350208..87392224)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (87553330..87595336)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24891 Neighboring gene ribosomal protein L31, pseudogene 4 Neighboring gene STARR-seq mESC enhancer starr_41399 Neighboring gene STARR-seq mESC enhancer starr_41400 Neighboring gene predicted gene, 41485 Neighboring gene predicted gene, 22808

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map. Reymond A, et al. Genomics, 2001 Nov. PMID 11707072
  2. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, et al. Nature, 2002 Dec 5. PMID 12466855
  3. Human chromosome 21 gene expression atlas in the mouse. Reymond A, et al. Nature, 2002 Dec 5. PMID 12466854
  4. A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Yokoyama S, et al. Dev Cell, 2009 Dec. PMID 20059953, Free PMC Article
  5. GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Visel A, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681479, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
MAP3K7 C-terminal-like protein
Names
TAK1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001417078.1 → NP_001404007.1  MAP3K7 C-terminal-like protein

    Status: VALIDATED

    Source sequence(s)
    AC154631, CT025527
    UniProtKB/Swiss-Prot
    P58500
    UniProtKB/TrEMBL
    Q544C0

  2. NM_144854.3 → NP_659103.1  MAP3K7 C-terminal-like protein

    See identical proteins and their annotated locations for NP_659103.1

    Status: VALIDATED

    Source sequence(s)
    AC154631, CT025527
    Consensus CDS
    CCDS28292.1
    UniProtKB/Swiss-Prot
    P58500
    UniProtKB/TrEMBL
    Q544C0
    Related
    ENSMUSP00000026700.8, ENSMUST00000026700.8
    Conserved Domains (1) summary
    TIGR04211
    Location:39 → 142
    SH3_and_anchor; SH3 domain protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    87350208..87392224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006523007.5 → XP_006523070.1  MAP3K7 C-terminal-like protein isoform X2

    Conserved Domains (1) summary
    TIGR04211
    Location:9 → 87
    SH3_and_anchor; SH3 domain protein
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P58500.1 GenPept UniProtKB/Swiss-Prot:P58500

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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