U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ftdc2 ferritin domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 224247, updated on 8-Feb-2024

Summary

Official Symbol
Ftdc2provided by MGI
Official Full Name
ferritin domain containing 2provided by MGI
Primary source
MGI:MGI:3045360
See related
Ensembl:ENSMUSG00000055789 AllianceGenome:MGI:3045360
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ftdc; E330017A01Rik
Summary
Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to be active in cytoplasm. Is expressed in oocyte; ovary; and primary oocyte. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
16 C1.2; 16 34.75 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (58455625..58458766, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (58635262..58638403, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41097 Neighboring gene predicted gene, 20942 Neighboring gene STARR-seq mESC enhancer starr_41098 Neighboring gene STARR-positive B cell enhancer ABC_E11619 Neighboring gene ferritin domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_41100 Neighboring gene STARR-positive B cell enhancer ABC_E7470 Neighboring gene predicted gene, 41464 Neighboring gene STARR-seq mESC enhancer starr_41101 Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Clone Names

  • MGC117520

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ferric iron binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ferrous iron binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in intracellular sequestering of iron ion IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein LOC224247

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175011.2NP_778176.1  uncharacterized protein LOC224247

    See identical proteins and their annotated locations for NP_778176.1

    Status: PREDICTED

    Source sequence(s)
    AK087761
    Consensus CDS
    CCDS28232.1
    UniProtKB/TrEMBL
    Q8BU47
    Related
    ENSMUSP00000056475.9, ENSMUST00000053249.9
    Conserved Domains (2) summary
    cd01056
    Location:8177
    Euk_Ferritin; eukaryotic ferritins
    pfam00210
    Location:13145
    Ferritin; Ferritin-like domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    58455625..58458766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)