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TREML5P triggering receptor expressed on myeloid cells like 5, pseudogene [ Homo sapiens (human) ]

Gene ID: 221438, updated on 10-Oct-2023

Summary

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Official Symbol
TREML5Pprovided by HGNC
Official Full Name
triggering receptor expressed on myeloid cells like 5, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:30808
See related
AllianceGenome:HGNC:30808
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TLT5; TREML2P; TREML2P1
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Genomic context

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Location:
6p21.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (41249377..41249589)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (41078673..41078888)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (41217115..41217327)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene triggering receptor expressed on myeloid cells like 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:41206864-41207400 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:41207401-41207935 Neighboring gene RNA, 5S ribosomal pseudogene 207 Neighboring gene triggering receptor expressed on myeloid cells 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17175 Neighboring gene RNA, U6 small nuclear 643, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The human TREM gene cluster at 6p21.1 encodes both activating and inhibitory single IgV domain receptors and includes NKp44. Allcock RJ, et al. Eur J Immunol, 2003 Feb. PMID 12645956

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • TREM like transcript 5
  • triggering receptor expressed on myeloid cells-like 2 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002794.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AF534827

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    41249377..41249589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    41078673..41078888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases