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Ubb-ps ubiquitin B, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 218963, updated on 17-Aug-2024

Summary

Official Symbol
Ubb-psprovided by MGI
Official Full Name
ubiquitin B, pseudogeneprovided by MGI
Primary source
MGI:MGI:3037679
See related
AllianceGenome:MGI:3037679
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1821
Expression
Ubiquitous expression in testis adult (RPKM 2802.8), whole brain E14.5 (RPKM 1612.9) and 28 other tissues See more
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Genomic context

See Ubb-ps in Genome Data Viewer
Location:
14 C1; 14 23.7 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (46321484..46322414)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (46084027..46084957)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm384 Neighboring gene DNA repair protein SWI5 homolog pseudogene Neighboring gene SUMO/sentrin specific peptidase 3 pseudogene Neighboring gene predicted gene, 53856 Neighboring gene predicted gene, 34499 Neighboring gene STARR-seq mESC enhancer starr_36560 Neighboring gene predicted gene 15217 Neighboring gene bone morphogenetic protein 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002875.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC163692

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    46321484..46322414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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