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Gm527 predicted gene 527 [ Mus musculus (house mouse) ]

Gene ID: 217648, updated on 5-Mar-2024

Summary

Official Symbol
Gm527provided by MGI
Official Full Name
predicted gene 527provided by MGI
Primary source
MGI:MGI:2685373
See related
Ensembl:ENSMUSG00000047227 AllianceGenome:MGI:2685373
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human C14orf28 (chromosome 14 open reading frame 28). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 8.2), CNS E18 (RPKM 2.0) and 11 other tissues See more
Orthologs
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Genomic context

Location:
12 C1; 12 27.21 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (64964685..64971365)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (64917911..64924591)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene ligatin pseudogene Neighboring gene STARR-seq mESC enhancer starr_32309 Neighboring gene ribosomal protein L7A, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_32310 Neighboring gene STARR-positive B cell enhancer mm9_chr12:66018613-66018914 Neighboring gene predicted gene, 51965 Neighboring gene kelch-like 28 Neighboring gene TOG array regulator of axonemal microtubules 1 Neighboring gene predicted gene, 51966

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Clone Names

  • MGC117765

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C14orf28 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025605.1NP_001020776.1  uncharacterized protein C14orf28 homolog

    See identical proteins and their annotated locations for NP_001020776.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099503
    Consensus CDS
    CCDS56841.1
    UniProtKB/Swiss-Prot
    Q4KL13
    UniProtKB/TrEMBL
    A0A1Y7VME2
    Related
    ENSMUSP00000059435.5, ENSMUST00000058135.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    64964685..64971365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)