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Tec tec protein tyrosine kinase [ Mus musculus (house mouse) ]

Gene ID: 21682, updated on 21-Apr-2024

Summary

Official Symbol
Tecprovided by MGI
Official Full Name
tec protein tyrosine kinaseprovided by MGI
Primary source
MGI:MGI:98662
See related
Ensembl:ENSMUSG00000029217 AllianceGenome:MGI:98662
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to be involved in several processes, including cell surface receptor signaling pathway; peptidyl-tyrosine autophosphorylation; and positive regulation of peptidyl-tyrosine phosphorylation. Predicted to act upstream of or within immune system process and phosphorylation. Located in cell-cell junction. Is expressed in several structures, including central nervous system; extraembryonic component; placenta; retina; and spleen. Orthologous to human TEC (tec protein tyrosine kinase). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta adult (RPKM 4.6), spleen adult (RPKM 4.0) and 27 other tissues See more
Orthologs
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Genomic context

Location:
5 C3.2; 5 38.44 cM
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (72913061..73025997, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (72755718..72868654, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene NIPA-like domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E3582 Neighboring gene TXK tyrosine kinase Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:73152561-73152781 Neighboring gene STARR-positive B cell enhancer ABC_E4762 Neighboring gene STARR-positive B cell enhancer ABC_E8061 Neighboring gene STARR-positive B cell enhancer ABC_E10324 Neighboring gene STARR-positive B cell enhancer ABC_E8821 Neighboring gene SLAIN motif family, member 2 Neighboring gene predicted gene, 54302 Neighboring gene predicted gene, 54289

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (3) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables non-membrane spanning protein tyrosine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables non-membrane spanning protein tyrosine kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in B cell receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in B cell receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in T cell receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adaptive immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
involved_in integrin-mediated signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in protein phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of platelet activation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cell-cell junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
tyrosine-protein kinase Tec
Names
cytoplasmic tyrosine kinase, Dscr28C related
protein tyrosine kinase TecI
protein tyrosine kinase TecIIA
protein tyrosine kinase TecIIB
protein tyrosine kinase TecIII
protein tyrosine kinase TecIV
NP_001106931.1
NP_001106932.1
NP_001106935.1
NP_038717.2
XP_006503908.1
XP_006503909.1
XP_006503910.1
XP_006503911.1
XP_011239020.1
XP_011239021.1
XP_036020885.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113460.2NP_001106931.1  tyrosine-protein kinase Tec isoform a

    See identical proteins and their annotated locations for NP_001106931.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same isoform (a).
    Source sequence(s)
    AC099698, AK139329, AK168460, CJ047828
    Consensus CDS
    CCDS51516.1
    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    UniProtKB/TrEMBL
    Q3U436
    Related
    ENSMUSP00000071836.7, ENSMUST00000071944.13
    Conserved Domains (4) summary
    cd10396
    Location:239346
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:182236
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:364623
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
  2. NM_001113461.2NP_001106932.1  tyrosine-protein kinase Tec isoform b

    See identical proteins and their annotated locations for NP_001106932.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. It encodes isoform b, which lacks an internal segment and is shorter than isoform a.
    Source sequence(s)
    AC099698, AK168452, AK168460, CJ047828
    Consensus CDS
    CCDS51515.1
    UniProtKB/TrEMBL
    Q3TH41, Q8CFK4
    Related
    ENSMUSP00000073509.7, ENSMUST00000073843.13
    Conserved Domains (6) summary
    cd10396
    Location:220324
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:342601
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    pfam00169
    Location:5111
    PH; PH domain
    pfam07714
    Location:347596
    Pkinase_Tyr; Protein tyrosine kinase
    cl17036
    Location:182223
    SH3; Src Homology 3 domain superfamily
  3. NM_001113464.2NP_001106935.1  tyrosine-protein kinase Tec isoform a

    See identical proteins and their annotated locations for NP_001106935.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (a).
    Source sequence(s)
    AC099698, AK139329, CJ047828
    Consensus CDS
    CCDS51516.1
    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    UniProtKB/TrEMBL
    Q3U436
    Related
    ENSMUSP00000109224.2, ENSMUST00000113594.8
    Conserved Domains (4) summary
    cd10396
    Location:239346
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:182236
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:364623
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
  4. NM_013689.5NP_038717.2  tyrosine-protein kinase Tec isoform c

    See identical proteins and their annotated locations for NP_038717.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) uses an alternate splice site and lacks an alternate in-frame exon in the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. It encodes isoform c, which is shorter and has a distinct N-terminus, compared to isoform a.
    Source sequence(s)
    AC099698, AK133418, AK139329
    UniProtKB/TrEMBL
    Q3TH41
    Conserved Domains (5) summary
    cd10396
    Location:139243
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd05114
    Location:261520
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    pfam07714
    Location:266515
    Pkinase_Tyr; Protein tyrosine kinase
    cl17036
    Location:101142
    SH3; Src Homology 3 domain superfamily
    cl17171
    Location:1167
    PH-like; Pleckstrin homology-like domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    72913061..73025997 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006503846.5XP_006503909.1  tyrosine-protein kinase Tec isoform X1

    See identical proteins and their annotated locations for XP_006503909.1

    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    UniProtKB/TrEMBL
    Q3U436
    Conserved Domains (4) summary
    cd10396
    Location:239346
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:182236
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:364623
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
  2. XM_011240719.4XP_011239021.1  tyrosine-protein kinase Tec isoform X1

    See identical proteins and their annotated locations for XP_011239021.1

    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    UniProtKB/TrEMBL
    Q3U436
    Conserved Domains (4) summary
    cd10396
    Location:239346
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:182236
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:364623
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
  3. XM_006503845.5XP_006503908.1  tyrosine-protein kinase Tec isoform X1

    See identical proteins and their annotated locations for XP_006503908.1

    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    UniProtKB/TrEMBL
    Q3U436
    Conserved Domains (4) summary
    cd10396
    Location:239346
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:182236
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:364623
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
  4. XM_011240718.3XP_011239020.1  tyrosine-protein kinase Tec isoform X1

    See identical proteins and their annotated locations for XP_011239020.1

    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    UniProtKB/TrEMBL
    Q3U436
    Conserved Domains (4) summary
    cd10396
    Location:239346
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:182236
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd01238
    Location:7148
    PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
    cd05114
    Location:364623
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
  5. XM_006503848.5XP_006503911.1  tyrosine-protein kinase Tec isoform X3

    See identical proteins and their annotated locations for XP_006503911.1

    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    Conserved Domains (4) summary
    cd10396
    Location:158265
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:101155
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd05114
    Location:283542
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    cl17171
    Location:1167
    PH-like; Pleckstrin homology-like domain
  6. XM_006503847.2XP_006503910.1  tyrosine-protein kinase Tec isoform X2

    UniProtKB/Swiss-Prot
    P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
    Conserved Domains (4) summary
    cd10396
    Location:206313
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:149203
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd05114
    Location:331590
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    cl17171
    Location:9115
    PH-like; Pleckstrin homology-like domain
  7. XM_036164992.1XP_036020885.1  tyrosine-protein kinase Tec isoform X4

    UniProtKB/TrEMBL
    I6L9F0
    Conserved Domains (3) summary
    cd10396
    Location:54161
    SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
    cd11905
    Location:151
    SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
    cd05114
    Location:179438
    PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase