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Wmp WAVE homology in membrane protrusions [ Mus musculus (house mouse) ]

Gene ID: 213450, updated on 8-Feb-2024

Summary

Official Symbol
Wmpprovided by MGI
Official Full Name
WAVE homology in membrane protrusionsprovided by MGI
Primary source
MGI:MGI:2685578
See related
Ensembl:ENSMUSG00000073006 AllianceGenome:MGI:2685578
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm732; Whimp
Summary
Predicted to enable Arp2/3 complex binding activity and protein kinase A regulatory subunit binding activity. Predicted to be involved in actin cytoskeleton organization and positive regulation of Arp2/3 complex-mediated actin nucleation. Predicted to be part of SCAR complex. Predicted to be active in lamellipodium. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 4.0) See more
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Genomic context

Location:
X D; X 47.66 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (106989341..106992042, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (107945735..107948436, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_47747 Neighboring gene T-box 22 Neighboring gene STARR-seq mESC enhancer starr_47748 Neighboring gene charged multivesicular body protein 1B2 Neighboring gene terminal nucleotidyltransferase 5D Neighboring gene STARR-seq mESC enhancer starr_47749 Neighboring gene STARR-seq mESC enhancer starr_47750 Neighboring gene STARR-seq mESC enhancer starr_47751 Neighboring gene STARR-seq mESC enhancer starr_47752 Neighboring gene STARR-seq mESC enhancer starr_47753 Neighboring gene MYST histone acetyltransferase (monocytic leukemia) 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47754 Neighboring gene predicted pseudogene 378

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables Arp2/3 complex binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein kinase A regulatory subunit binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of Arp2/3 complex-mediated actin nucleation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of SCAR complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in lamellipodium IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein LOC213450

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033252.2NP_001028424.1  uncharacterized protein LOC213450

    See identical proteins and their annotated locations for NP_001028424.1

    Status: PREDICTED

    Source sequence(s)
    AK132985
    Consensus CDS
    CCDS30352.1
    UniProtKB/TrEMBL
    Q3V0P9
    Related
    ENSMUSP00000098848.2, ENSMUST00000101290.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    106989341..106992042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)