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Ccdc191 coiled-coil domain containing 191 [ Mus musculus (house mouse) ]

Gene ID: 212153, updated on 5-Mar-2024

Summary

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Official Symbol
Ccdc191provided by MGI
Official Full Name
coiled-coil domain containing 191provided by MGI
Primary source
MGI:MGI:1922661
See related
Ensembl:ENSMUSG00000022701 AllianceGenome:MGI:1922661
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2610015P09Rik; 8430422M09Rik
Summary
Is expressed in adrenal cortex; olfactory epithelium; and renal capsule. Orthologous to human CCDC191 (coiled-coil domain containing 191). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis adult (RPKM 1.9), CNS E11.5 (RPKM 1.6) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
16 B4; 16 28.44 cM
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (43710172..43784677)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (43889809..43964314)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26074 Neighboring gene STARR-seq mESC enhancer starr_40888 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2 Neighboring gene STARR-positive B cell enhancer ABC_E1924 Neighboring gene predicted gene, 25989 Neighboring gene STARR-positive B cell enhancer mm9_chr16:43951746-43952047 Neighboring gene zinc finger, DHHC domain containing 23 Neighboring gene predicted gene, 46552 Neighboring gene GRAM domain containing 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
  2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
  3. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article
  4. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  5. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables phosphatase binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
coiled-coil domain-containing protein 191

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027801.1 → NP_082077.1  coiled-coil domain-containing protein 191

    Status: PROVISIONAL

    Source sequence(s)
    CT025520
    Consensus CDS
    CCDS57030.1
    UniProtKB/TrEMBL
    B8JJH0, J3QQ27
    Related
    ENSMUSP00000137597.2, ENSMUST00000178400.9
    Conserved Domains (3) summary
    PTZ00121
    Location:116 → 292
    PTZ00121; MAEBL; Provisional
    pfam07946
    Location:657 → 699
    DUF1682; Protein of unknown function (DUF1682)
    pfam08457
    Location:695 → 847
    Sfi1; Sfi1 spindle body protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    43710172..43784677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006521958.2 → XP_006522021.1  coiled-coil domain-containing protein 191 isoform X2

    UniProtKB/TrEMBL
    B8JJH0
    Conserved Domains (3) summary
    PTZ00121
    Location:19 → 417
    PTZ00121; MAEBL; Provisional
    pfam08457
    Location:733 → 885
    Sfi1; Sfi1 spindle body protein
    pfam15927
    Location:693 → 764
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  2. XM_030249034.2 → XP_030104894.1  coiled-coil domain-containing protein 191 isoform X3

    UniProtKB/TrEMBL
    B8JJH0
    Conserved Domains (3) summary
    PTZ00121
    Location:116 → 288
    PTZ00121; MAEBL; Provisional
    pfam08457
    Location:725 → 877
    Sfi1; Sfi1 spindle body protein
    pfam15927
    Location:685 → 756
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  3. XM_030249033.1 → XP_030104893.1  coiled-coil domain-containing protein 191 isoform X1

    UniProtKB/TrEMBL
    B8JJH0
    Conserved Domains (3) summary
    PTZ00121
    Location:129 → 301
    PTZ00121; MAEBL; Provisional
    pfam08457
    Location:738 → 890
    Sfi1; Sfi1 spindle body protein
    pfam15927
    Location:698 → 769
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  4. XM_030249035.1 → XP_030104895.1  coiled-coil domain-containing protein 191 isoform X4

    UniProtKB/TrEMBL
    B8JJH0
    Conserved Domains (3) summary
    PTZ00121
    Location:129 → 301
    PTZ00121; MAEBL; Provisional
    pfam08457
    Location:708 → 860
    Sfi1; Sfi1 spindle body protein
    pfam15927
    Location:668 → 739
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  5. XM_036159866.1 → XP_036015759.1  coiled-coil domain-containing protein 191 isoform X5

    UniProtKB/TrEMBL
    B8JJH0
    Conserved Domains (3) summary
    PTZ00121
    Location:11 → 269
    PTZ00121; MAEBL; Provisional
    pfam08457
    Location:608 → 760
    Sfi1; Sfi1 spindle body protein
    pfam15927
    Location:545 → 616
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

RNA

  1. XR_003951771.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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