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Hus1b HUS1 checkpoint clamp component B [ Mus musculus (house mouse) ]

Gene ID: 210554, updated on 11-Apr-2024

Summary

Official Symbol
Hus1bprovided by MGI
Official Full Name
HUS1 checkpoint clamp component Bprovided by MGI
Primary source
MGI:MGI:2671003
See related
Ensembl:ENSMUSG00000076430 AllianceGenome:MGI:2671003
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be involved in DNA integrity checkpoint signaling and DNA metabolic process. Predicted to be located in nucleolus. Predicted to be part of checkpoint clamp complex. Predicted to be active in site of double-strand break. Orthologous to human HUS1B (HUS1 checkpoint clamp component B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Hus1b in Genome Data Viewer
Location:
13 A3.2; 13 13.33 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (31130559..31131744, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (30946576..30947761, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5386 Neighboring gene dual specificity phosphatase 22 Neighboring gene STARR-seq mESC enhancer starr_34069 Neighboring gene STARR-positive B cell enhancer ABC_E10787 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:30853140-30853323 Neighboring gene interferon regulatory factor 4 Neighboring gene exocyst complex component 2 Neighboring gene STARR-positive B cell enhancer ABC_E11781 Neighboring gene predicted gene, 35302 Neighboring gene RIKEN cDNA 4930401O12 gene

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 
involved_in double-strand break repair via homologous recombination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in meiotic DNA integrity checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic DNA replication checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitotic intra-S DNA damage checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nucleotide-excision repair IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in telomere maintenance IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of checkpoint clamp complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
is_active_in site of double-strand break IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
checkpoint protein HUS1B
Names
Hus1 checkpoint homolog b
Hus1 homolog b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153072.2NP_694712.1  checkpoint protein HUS1B

    See identical proteins and their annotated locations for NP_694712.1

    Status: VALIDATED

    Source sequence(s)
    AL606764
    Consensus CDS
    CCDS26421.1
    UniProtKB/Swiss-Prot
    Q8K572
    UniProtKB/TrEMBL
    Q059L7
    Related
    ENSMUSP00000100007.2, ENSMUST00000102943.2
    Conserved Domains (1) summary
    pfam04005
    Location:1276
    Hus1; Hus1-like protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    31130559..31131744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)