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Zfp804b zinc finger protein 804B [ Mus musculus (house mouse) ]

Gene ID: 207618, updated on 5-Mar-2024

Summary

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Official Symbol
Zfp804bprovided by MGI
Official Full Name
zinc finger protein 804Bprovided by MGI
Primary source
MGI:MGI:2685287
See related
Ensembl:ENSMUSG00000092094 AllianceGenome:MGI:2685287
Gene type
protein coding
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm441
Summary
Predicted to be active in nucleus. Orthologous to human ZNF804B (zinc finger protein 804B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
human all
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Genomic context

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Location:
5 A1; 5 3.2 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (6819030..7394378, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (6769030..7344378, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_12364 Neighboring gene zinc finger protein 28 pseudogene Neighboring gene STARR-seq mESC enhancer starr_12368 Neighboring gene STARR-seq mESC enhancer starr_12369 Neighboring gene predicted gene 5714 Neighboring gene small nuclear ribonucleoprotein-associated protein N pseudogene Neighboring gene STARR-seq mESC enhancer starr_12370 Neighboring gene tubulin, beta 4B class IVB, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_12371 Neighboring gene predicted gene, 24525 Neighboring gene STARR-seq mESC enhancer starr_12372 Neighboring gene STARR-seq mESC enhancer starr_12373 Neighboring gene testis expressed 47 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 57840

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
zinc finger protein 804B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163223.1 → NP_001156695.1  zinc finger protein 804B

    Status: INFERRED

    Source sequence(s)
    AC112662, AC112938, AC115629
    Consensus CDS
    CCDS80204.1
    UniProtKB/TrEMBL
    A0A0G2JGH6, F6QGP8
    Related
    ENSMUSP00000143568.2, ENSMUST00000200317.5
    Conserved Domains (1) summary
    pfam12171
    Location:56 → 83
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    6819030..7394378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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