U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Spink1 serine peptidase inhibitor, Kazal type 1 [ Mus musculus (house mouse) ]

Gene ID: 20730, updated on 21-Apr-2024

Summary

Official Symbol
Spink1provided by MGI
Official Full Name
serine peptidase inhibitor, Kazal type 1provided by MGI
Primary source
MGI:MGI:106202
See related
Ensembl:ENSMUSG00000024503 AllianceGenome:MGI:106202
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
p12; Spink3
Summary
Enables serine-type endopeptidase inhibitor activity. Acts upstream of or within several processes, including negative regulation of cellular protein metabolic process; negative regulation of nitric oxide mediated signal transduction; and regulation of calcium ion transport. Located in extracellular space. Is expressed in embryo ectoderm; embryo endoderm; genitourinary system; gut; and yolk sac. Human ortholog(s) of this gene implicated in pancreatitis. Orthologous to human SPINK1 (serine peptidase inhibitor Kazal type 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 309.1), placenta adult (RPKM 259.9) and 7 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
18 B3; 18 23.47 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (43861134..43870302, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (43728069..43737237, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3650 Neighboring gene eukaryotic translation initiation factor 3, subunit J2 Neighboring gene janus kinase and microtubule interacting protein 2 Neighboring gene STARR-seq mESC enhancer starr_44453 Neighboring gene STARR-seq mESC enhancer starr_44454 Neighboring gene secretoglobin, family 3A, member 2 Neighboring gene predicted gene 94

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (4)  1 citation
  • Endonuclease-mediated (4) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC107555

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
serine protease inhibitor Kazal-type 1
Names
prostatic secretory glycoprotein
serine peptidase inhibitor, Kazal type 3
serine protease inhibitor Kazal-type 3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009258.5NP_033284.1  serine protease inhibitor Kazal-type 1 precursor

    See identical proteins and their annotated locations for NP_033284.1

    Status: VALIDATED

    Source sequence(s)
    AV048854, CA481615
    Consensus CDS
    CCDS37803.1
    UniProtKB/Swiss-Prot
    P09036, Q5M9M3
    Related
    ENSMUSP00000025381.3, ENSMUST00000025381.4
    Conserved Domains (1) summary
    cd01327
    Location:3980
    KAZAL_PSTI; Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    43861134..43870302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)