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Serpinb5 serine (or cysteine) peptidase inhibitor, clade B, member 5 [ Mus musculus (house mouse) ]

Gene ID: 20724, updated on 11-Apr-2024

Summary

Official Symbol
Serpinb5provided by MGI
Official Full Name
serine (or cysteine) peptidase inhibitor, clade B, member 5provided by MGI
Primary source
MGI:MGI:109579
See related
Ensembl:ENSMUSG00000067006 AllianceGenome:MGI:109579
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PI-5; Spi7; Maspin; ovalbumin; 1110036M19Rik
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within several processes, including extracellular matrix organization; prostate gland morphogenesis; and regulation of epithelial cell proliferation. Located in cytoplasm. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; respiratory system; and sensory organ. Orthologous to human SERPINB5 (serpin family B member 5). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in bladder adult (RPKM 5.5), colon adult (RPKM 2.3) and 7 other tissues See more
Orthologs
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Genomic context

Location:
1 E2.1; 1 50.34 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (106788905..106811078)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (106861175..106883348)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene 3-ketodihydrosphingosine reductase Neighboring gene STARR-positive B cell enhancer ABC_E4341 Neighboring gene vacuolar protein sorting 4B Neighboring gene STARR-positive B cell enhancer ABC_E3296 Neighboring gene predicted gene, 53577 Neighboring gene STARR-positive B cell enhancer ABC_E10027 Neighboring gene STARR-seq mESC enhancer starr_01863 Neighboring gene STARR-seq mESC enhancer starr_01864 Neighboring gene POU domain, class 2, transcription factor 3, related sequence 1 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cornified envelope IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in sarcoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
serpin B5
Names
peptidase inhibitor 5
protease inhibitor 5
serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 5
serine (or cysteine) proteinase inhibitor, clade B, member 5
serine protease inhibitor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001360853.1NP_001347782.1  serpin B5 isoform a

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Variants 1 and 2 both encode the same isoform (a).
    Source sequence(s)
    AC025047, AC163626, AK136532, U54705
    Consensus CDS
    CCDS35684.1
    UniProtKB/Swiss-Prot
    P70124, Q3ULZ0
    Related
    ENSMUSP00000108350.2, ENSMUST00000112730.8
    Conserved Domains (1) summary
    cd02057
    Location:4375
    maspin_like; Maspin (mammary serine proteinase inhibitor), a member of the serpin superfamily, with a multitude of effects on cells and tissues at an assortment of developmental stages. Maspin has tumor suppressing activity against breast and prostate cancer. In ...
  2. NM_001360854.1NP_001347783.1  serpin B5 isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a.
    Source sequence(s)
    AC025047, AC163626
    Conserved Domains (1) summary
    cl00137
    Location:1204
    SERPIN; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate ...
  3. NM_009257.4NP_033283.1  serpin B5 isoform a

    See identical proteins and their annotated locations for NP_033283.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same isoform (a).
    Source sequence(s)
    AC025047, AC163626, AK136532
    Consensus CDS
    CCDS35684.1
    UniProtKB/Swiss-Prot
    P70124, Q3ULZ0
    Related
    ENSMUSP00000083908.7, ENSMUST00000086701.13
    Conserved Domains (1) summary
    cd02057
    Location:4375
    maspin_like; Maspin (mammary serine proteinase inhibitor), a member of the serpin superfamily, with a multitude of effects on cells and tissues at an assortment of developmental stages. Maspin has tumor suppressing activity against breast and prostate cancer. In ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    106788905..106811078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)