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Rnu7 U7 small nuclear RNA [ Mus musculus (house mouse) ]

Gene ID: 19866, updated on 8-Feb-2024

Summary

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Official Symbol
Rnu7provided by MGI
Official Full Name
U7 small nuclear RNAprovided by MGI
Primary source
MGI:MGI:97992
See related
Ensembl:ENSMUSG00000089083 AllianceGenome:MGI:97992
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Acts upstream of or within RNA processing. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See Rnu7 in Genome Data Viewer
Location:
6 F2; 6 59.17 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (124718188..124718249, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (124741225..124741286, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4862 Neighboring gene protein tyrosine phosphatase, non-receptor type 6 Neighboring gene STARR-positive B cell enhancer ABC_E6486 Neighboring gene gene rich cluster, C10 gene Neighboring gene STARR-positive B cell enhancer ABC_E8991 Neighboring gene atrophin 1 Neighboring gene STARR-seq mESC enhancer starr_17303 Neighboring gene enolase 2, gamma neuronal

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural and functional characterization of mouse U7 small nuclear RNA active in 3' processing of histone pre-mRNA. Soldati D, et al. Mol Cell Biol, 1988 Apr. PMID 3380087, Free PMC Article
  2. Nucleotide sequence of the mouse U7 snRNA gene. Phillips SC, et al. Nucleic Acids Res, 1991 Mar 25. PMID 2030952, Free PMC Article
  3. A transcriptional analysis of the gene encoding mouse U7 small nuclear RNA. Phillips SC, et al. Gene, 1992 Jul 15. PMID 1634116
  4. Primer extension analysis of mouse U7 small nuclear RNA gene expression. Kirby BJ, et al. Biochem Soc Trans, 1992 Feb. PMID 1633969
  5. Specific contacts between mammalian U7 snRNA and histone precursor RNA are indispensable for the in vitro 3' RNA processing reaction. Cotten M, et al. EMBO J, 1988 Mar. PMID 3396543, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within RNA processing IDA
Inferred from Direct Assay
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024201.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC164157
    Related
    ENSMUST00000158458.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    124718188..124718249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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