U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zfp982 zinc finger protein 982 [ Mus musculus (house mouse) ]

Gene ID: 195531, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Zfp982provided by MGI
Official Full Name
zinc finger protein 982provided by MGI
Primary source
MGI:MGI:3701121
See related
Ensembl:ENSMUSG00000078496 AllianceGenome:MGI:3701121
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13152
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in epiblast and primitive endoderm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in bladder adult (RPKM 1.7), CNS E11.5 (RPKM 1.3) and 17 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
4 E1; 4 78.5 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (147527571..147600521)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (147443114..147516064)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr4:146680009-146680309 Neighboring gene STARR-seq mESC enhancer starr_12051 Neighboring gene zinc finger protein 988 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146701337-146701637 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146707438-146707739 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146708882-146709183 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146709639-146709939 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146710317-146710618 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146711266-146711567 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146711748-146712049 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146713593-146713894 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146718347-146718647 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146719638-146719939 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146732156-146732457 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146734141-146734442 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146736508-146736808 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146739365-146739666 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146751603-146751903 Neighboring gene zinc finger protein 978 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146754866-146755167 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146762351-146762652 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146764074-146764374 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146766178-146766479 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146766804-146767105 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146768262-146768563 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146769615-146769916 Neighboring gene high mobility group box 1-like pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E3547 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146779152-146779453 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146779533-146779834 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146779911-146780211 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146782049-146782350 Neighboring gene STARR-seq mESC enhancer starr_12053 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146793859-146794160 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146795582-146795882 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146801970-146802271 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146802879-146803179 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146803319-146803620 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146804225-146804526 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146805098-146805399 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146808010-146808311 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146808409-146808709 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146811551-146811852 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146812536-146812836 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146813710-146814011 Neighboring gene STARR-seq mESC enhancer starr_12054 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146820564-146820864 Neighboring gene STARR-seq mESC enhancer starr_12055 Neighboring gene vomeronasal 2, receptor, pseudogene 19 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146826142-146826443 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146830236-146830536 Neighboring gene tousled-like kinase 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_12056 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146871800-146872101 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146881635-146881936 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146883327-146883628 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146885233-146885534 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146893742-146894043 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146896025-146896326 Neighboring gene STARR-positive B cell enhancer mm9_chr4:146898623-146898924 Neighboring gene STARR-positive B cell enhancer ABC_E10290 Neighboring gene vomeronasal 2, receptor, pseudogene 20 Neighboring gene 60S ribosomal protein L29 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Venus trap in the mouse embryo reveals distinct molecular dynamics underlying specification of first embryonic lineages. Dietrich JE, et al. EMBO Rep, 2015 Aug. PMID 26142281, Free PMC Article
  2. Transcriptome analysis of mouse stem cells and early embryos. Sharov AA, et al. PLoS Biol, 2003 Dec. PMID 14691545, Free PMC Article
  3. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, et al. Science, 2004 Dec 24. PMID 15618518
  4. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  5. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC60813, MGC76795

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
  
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in nuclear body ISO
Inferred from Sequence Orthology
more info
  
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus ISO
Inferred from Sequence Orthology
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC195531

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039209.4 → NP_001034298.2  uncharacterized protein LOC195531

    Status: VALIDATED

    Source sequence(s)
    AL626778
    Consensus CDS
    CCDS84824.1
    UniProtKB/TrEMBL
    A2A8Q4
    Related
    ENSMUSP00000068021.8, ENSMUST00000063704.8
    Conserved Domains (3) summary
    COG5048
    Location:71 → 349
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:216 → 236
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:12 → 52
    KRAB; KRAB box

  2. NM_001365422.2 → NP_001352351.1  uncharacterized protein LOC195531

    Status: VALIDATED

    Source sequence(s)
    AL626778
    Consensus CDS
    CCDS84824.1
    UniProtKB/TrEMBL
    A2A8Q4
    Related
    ENSMUSP00000101346.3, ENSMUST00000105721.9
    Conserved Domains (3) summary
    COG5048
    Location:71 → 349
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:216 → 236
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:12 → 52
    KRAB; KRAB box

  3. NM_001371348.1 → NP_001358277.1  uncharacterized protein LOC195531

    Status: VALIDATED

    Source sequence(s)
    AL626778
    Consensus CDS
    CCDS84824.1
    UniProtKB/TrEMBL
    A2A8Q4
    Conserved Domains (3) summary
    COG5048
    Location:71 → 349
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:216 → 236
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:12 → 52
    KRAB; KRAB box

  4. NM_001371349.1 → NP_001358278.1  uncharacterized protein LOC195531

    Status: VALIDATED

    Source sequence(s)
    AL626778
    Consensus CDS
    CCDS84824.1
    UniProtKB/TrEMBL
    A2A8Q4
    Conserved Domains (3) summary
    COG5048
    Location:71 → 349
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:216 → 236
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:12 → 52
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    147527571..147600521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous