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Myh4 myosin, heavy polypeptide 4, skeletal muscle [ Mus musculus (house mouse) ]

Gene ID: 17884, updated on 11-Apr-2024

Summary

Official Symbol
Myh4provided by MGI
Official Full Name
myosin, heavy polypeptide 4, skeletal muscleprovided by MGI
Primary source
MGI:MGI:1339713
See related
Ensembl:ENSMUSG00000057003 AllianceGenome:MGI:1339713
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MM; MHC2B; Myhsf; MYH-2B; Minmus; Minimsc; MyHC-IIb
Summary
Predicted to enable double-stranded RNA binding activity. Acts upstream of or within response to activity. Predicted to be located in myofibril. Predicted to be part of myosin complex. Is expressed in several structures, including brown fat; diaphragm; heart; limb segment; and skeletal musculature. Orthologous to human MYH4 (myosin heavy chain 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward mammary gland adult (RPKM 118.7) See more
Orthologs
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Genomic context

See Myh4 in Genome Data Viewer
Location:
11 B3; 11 40.59 cM
Exon count:
40
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (67128638..67151273)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (67237812..67260447)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene myosin, heavy polypeptide 2, skeletal muscle, adult Neighboring gene myosin, heavy polypeptide 1, skeletal muscle, adult Neighboring gene myosin heavy chain gene antisense RNA Neighboring gene STARR-seq mESC enhancer starr_29797 Neighboring gene myosin, heavy polypeptide 8, skeletal muscle, perinatal Neighboring gene nuclear encoded tRNA proline 2 (anticodon TGG) Neighboring gene STARR-seq mESC enhancer starr_29799 Neighboring gene myosin, heavy polypeptide 13, skeletal muscle Neighboring gene predicted gene, 40029

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 
enables double-stranded RNA binding ISO
Inferred from Sequence Orthology
more info
PubMed 
enables microfilament motor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in muscle contraction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in muscle contraction ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within response to activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in myofibril ISO
Inferred from Sequence Orthology
more info
 
part_of myosin II complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 
is_active_in myosin filament IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
myosin-4
Names
myHC-2b
myosin heavy chain 2b
myosin heavy chain 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010855.3NP_034985.2  myosin-4

    See identical proteins and their annotated locations for NP_034985.2

    Status: VALIDATED

    Source sequence(s)
    AK138608, AL596129
    Consensus CDS
    CCDS24856.1
    UniProtKB/Swiss-Prot
    B9EJ73, Q5SX39
    UniProtKB/TrEMBL
    B2RWX0
    Related
    ENSMUSP00000018632.5, ENSMUST00000018632.11
    Conserved Domains (3) summary
    cd14915
    Location:100770
    MYSc_Myh4; class II myosin heavy chain 4, motor domain
    pfam02736
    Location:3573
    Myosin_N; Myosin N-terminal SH3-like domain
    cl25732
    Location:8501927
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    67128638..67151273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)