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Myh11 myosin, heavy polypeptide 11, smooth muscle [ Mus musculus (house mouse) ]

Gene ID: 17880, updated on 11-Apr-2024

Summary

Official Symbol
Myh11provided by MGI
Official Full Name
myosin, heavy polypeptide 11, smooth muscleprovided by MGI
Primary source
MGI:MGI:102643
See related
Ensembl:ENSMUSG00000018830 AllianceGenome:MGI:102643
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SM1; SM2; smMHC
Summary
Enables cytoskeletal motor activity. Acts upstream of or within smooth muscle contraction. Located in brush border; smooth muscle contractile fiber; and stress fiber. Part of muscle myosin complex. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and liver and biliary system. Human ortholog(s) of this gene implicated in patent ductus arteriosus and thoracic aortic aneurysm. Orthologous to human MYH11 (myosin heavy chain 11). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in bladder adult (RPKM 911.5), colon adult (RPKM 71.0) and 1 other tissue See more
Orthologs
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Genomic context

Location:
16 A1; 16 9.71 cM
Exon count:
44
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (14012392..14109227, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (14194527..14292188, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7428 Neighboring gene STARR-positive B cell enhancer ABC_E4155 Neighboring gene STARR-seq mESC enhancer starr_40176 Neighboring gene microRNA 484 Neighboring gene nudE neurodevelopment protein 1 Neighboring gene STARR-seq mESC enhancer starr_40179 Neighboring gene centrosomal protein 20 Neighboring gene STARR-seq mESC enhancer starr_40180 Neighboring gene ATP-binding cassette, sub-family C member 1 Neighboring gene predicted gene, 23116

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
enables cytoskeletal motor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables microfilament motor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of muscle ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in actomyosin structure organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cardiac muscle cell development ISO
Inferred from Sequence Orthology
more info
 
involved_in elastic fiber assembly ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within smooth muscle contraction IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within smooth muscle contraction IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in brush border IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of muscle myosin complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of myosin II complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of myosin complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in myosin filament IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in smooth muscle contractile fiber IDA
Inferred from Direct Assay
more info
PubMed 
located_in stress fiber IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
myosin-11
Names
myosin heavy chain 11, smooth muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001161775.2NP_001155247.1  myosin-11 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon in the 3' coding region, compared to variant 1, that causes a frameshift. The resulting protein (isoform 2) has a longer and distinct C-terminus compared to isoform 1.
    Source sequence(s)
    AC164291
    Consensus CDS
    CCDS88881.1
    UniProtKB/TrEMBL
    E9QPE7, Q69ZX3
    Related
    ENSMUSP00000087756.5, ENSMUST00000090287.5
    Conserved Domains (8) summary
    cl14654
    Location:10201292
    V_Alix_like; Protein-interacting V-domain of mammalian Alix and related domains
    cd14921
    Location:99771
    MYSc_Myh11; class II myosin heavy chain 11, motor domain
    pfam00063
    Location:87771
    Myosin_head; Myosin head (motor domain)
    pfam01576
    Location:8481928
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:3471
    Myosin_N; Myosin N-terminal SH3-like domain
    pfam16046
    Location:9901082
    FAM76; FAM76 protein
    cl23717
    Location:10661124
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    cl24005
    Location:17801867
    DUF2570; Protein of unknown function (DUF2570)
  2. NM_001402795.1NP_001389724.1  myosin-11 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC164291
    UniProtKB/TrEMBL
    A0A338P6K2
    Related
    ENSMUSP00000156021.2, ENSMUST00000231567.2
  3. NM_001402796.1NP_001389725.1  myosin-11 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC164291
  4. NM_013607.3NP_038635.2  myosin-11 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript but encodes the shorter isoform (1).
    Source sequence(s)
    AC164291
    Consensus CDS
    CCDS27972.1
    UniProtKB/TrEMBL
    A0A2R8VHF9, Q69ZX3
    Related
    ENSMUSP00000155052.2, ENSMUST00000230397.2
    Conserved Domains (9) summary
    cl14654
    Location:10201292
    V_Alix_like; Protein-interacting V-domain of mammalian Alix and related domains
    cd14921
    Location:99771
    MYSc_Myh11; class II myosin heavy chain 11, motor domain
    pfam00063
    Location:87771
    Myosin_head; Myosin head (motor domain)
    pfam01576
    Location:8481928
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:3471
    Myosin_N; Myosin N-terminal SH3-like domain
    pfam09798
    Location:18191935
    LCD1; DNA damage checkpoint protein
    pfam16046
    Location:9901082
    FAM76; FAM76 protein
    cl23717
    Location:10661124
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    cl24005
    Location:17801867
    DUF2570; Protein of unknown function (DUF2570)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    14012392..14109227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006521845.1XP_006521908.1  myosin-11 isoform X3

    Conserved Domains (2) summary
    cl22853
    Location:131
    Motor_domain; Myosin and Kinesin motor domain
    pfam01576
    Location:1081188
    Myosin_tail_1; Myosin tail