U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Mknk1 MAP kinase-interacting serine/threonine kinase 1 [ Mus musculus (house mouse) ]

Gene ID: 17346, updated on 5-Mar-2024

Summary

Official Symbol
Mknk1provided by MGI
Official Full Name
MAP kinase-interacting serine/threonine kinase 1provided by MGI
Primary source
MGI:MGI:894316
See related
Ensembl:ENSMUSG00000028708 AllianceGenome:MGI:894316
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mnk1; 2410048M24Rik
Summary
This gene encodes a serine-threonine protein kinase that is activated by extracellular signal-regulated kinase or p38 mitogen-activated protein kinases, and it may function in cytokine and environmental stress responses. This kinase is required for phosphorylation of eukaryotic translation initiation factor 4E but it is not required for cell growth during development. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Oct 2013]
Expression
Ubiquitous expression in thymus adult (RPKM 21.1), lung adult (RPKM 18.5) and 28 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
4 D1; 4 53.06 cM
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (115695140..115736453)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (115837943..115879256)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene ATP synthase mitochondrial F1 complex assembly factor 1 Neighboring gene MOB kinase activator 3C Neighboring gene STARR-seq mESC enhancer starr_11125 Neighboring gene STARR-positive B cell enhancer ABC_E1650 Neighboring gene STARR-positive B cell enhancer ABC_E6199 Neighboring gene kinocilin Neighboring gene transmembrane protein 275

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IDA
Inferred from Direct Assay
more info
PubMed 
enables ATP binding ISO
Inferred from Sequence Orthology
more info
 
enables calcium-dependent protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calmodulin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calmodulin-dependent protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
MAP kinase-interacting serine/threonine-protein kinase 1
Names
MAPK signal-integrating kinase 1
NP_001272416.1
NP_001272417.1
NP_001342103.1
NP_001356167.1
NP_067436.1
XP_006502885.1
XP_006502888.1
XP_030109148.1
XP_036019677.1
XP_036019678.1
XP_036019679.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001285487.1NP_001272416.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform a

    See identical proteins and their annotated locations for NP_001272416.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a).
    Source sequence(s)
    AK141298, AL627085, BB841753, BQ551007, BY209061, CN538557, CO425179
    UniProtKB/TrEMBL
    Q3TDV2, Q3U1I8
    Related
    ENSMUST00000144235.8
    Conserved Domains (1) summary
    cd14174
    Location:40328
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  2. NM_001285488.1NP_001272417.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform b

    See identical proteins and their annotated locations for NP_001272417.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) lacks a portion of the 5' UTR and 5' coding region, and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
    Source sequence(s)
    AK141298, AL627085, BQ551007, BY209061, CN538557, CO425179
    Consensus CDS
    CCDS18498.1
    UniProtKB/TrEMBL
    A2A8W8, Q3TDV2
    Related
    ENSMUSP00000102123.4, ENSMUST00000106513.10
    Conserved Domains (2) summary
    smart00220
    Location:41321
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14174
    Location:34322
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  3. NM_001355174.1NP_001342103.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform c

    Status: REVIEWED

    Source sequence(s)
    AK141298, BP762163, BQ551007, BY209061, CN538557, CO425179
    Conserved Domains (1) summary
    cd14174
    Location:34322
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  4. NM_001369238.1NP_001356167.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform d

    Status: REVIEWED

    Source sequence(s)
    AL627085
    UniProtKB/TrEMBL
    Q3TDV2
    Conserved Domains (1) summary
    cl21453
    Location:34290
    PKc_like; Protein Kinases, catalytic domain
  5. NM_021461.5NP_067436.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform b

    See identical proteins and their annotated locations for NP_067436.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) lacks a portion of the 5' UTR and 5' coding region, and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
    Source sequence(s)
    AK141298, BQ551007, BY209061, CN538557, CO425179
    Consensus CDS
    CCDS18498.1
    UniProtKB/TrEMBL
    A2A8W8, Q3TDV2
    Related
    ENSMUSP00000019677.6, ENSMUST00000019677.12
    Conserved Domains (2) summary
    smart00220
    Location:41321
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14174
    Location:34322
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    115695140..115736453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163785.1XP_036019678.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform X5

    Conserved Domains (1) summary
    cd14174
    Location:34322
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  2. XM_006502822.4XP_006502885.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform X1

    See identical proteins and their annotated locations for XP_006502885.1

    UniProtKB/TrEMBL
    Q3TDV2, Q3U1I8
    Conserved Domains (1) summary
    cd14174
    Location:40328
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  3. XM_006502825.4XP_006502888.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform X3

    Conserved Domains (1) summary
    cd14174
    Location:40328
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  4. XM_036163784.1XP_036019677.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform X2

    UniProtKB/TrEMBL
    Q3TDV2
    Conserved Domains (1) summary
    cd14174
    Location:38326
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1
  5. XM_036163786.1XP_036019679.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform X6

    Conserved Domains (1) summary
    cl21453
    Location:31235
    PKc_like; Protein Kinases, catalytic domain
  6. XM_030253288.2XP_030109148.1  MAP kinase-interacting serine/threonine-protein kinase 1 isoform X4

    Conserved Domains (1) summary
    cd14174
    Location:38326
    STKc_Mnk1; Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase signal-integrating kinase 1