U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

nlp-4 Transthyretin-like family protein [ Caenorhabditis elegans ]

Gene ID: 172932, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
nlp-4
Gene description
Transthyretin-like family protein
Primary source
WormBase:WBGene00003742
Locus tag
CELE_F59C6.6
See related
AllianceGenome:WB:WBGene00003742
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in cell surface and extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (10517321..10518055, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribosomal RNA-processing protein 40 Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Neuropeptide-like protein diversity in phylum Nematoda. McVeigh P, et al. Int J Parasitol, 2008 Nov. PMID 18602104
  2. Identification of neuropeptide-like protein gene families in Caenorhabditiselegans and other species. Nathoo AN, et al. Proc Natl Acad Sci U S A, 2001 Nov 20. PMID 11717458, Free PMC Article
  3. Neuropeptide gene families in the nematode Caenorhabditis elegans. Li C, et al. Ann N Y Acad Sci, 1999. PMID 10676452
  4. Discovering neuropeptides in Caenorhabditis elegans by two dimensional liquid chromatography and mass spectrometry. Husson SJ, et al. Biochem Biophys Res Commun, 2005 Sep 16. PMID 16061202
  5. Ethanol-response genes and their regulation analyzed by a microarray and comparative genomic approach in the nematode Caenorhabditis elegans. Kwon JY, et al. Genomics, 2004 Apr. PMID 15028283

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Transthyretin-like family protein
NP_492750.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    10517321..10518055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060349.6 → NP_492750.2  Transthyretin-like family protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492750.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93832
    Conserved Domains (1) summary
    pfam01060
    Location:26 → 108
    TTR-52; Transthyretin-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Tools