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DHFRP3 dihydrofolate reductase pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 1720, updated on 10-Oct-2023

Summary

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Official Symbol
DHFRP3provided by HGNC
Official Full Name
dihydrofolate reductase pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:52354
See related
AllianceGenome:HGNC:52354
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (82856803..82857769)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (82857006..82857972)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (83083927..83084893)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374831 Neighboring gene MT-CYB pseudogene 7 Neighboring gene Sharpr-MPRA regulatory region 13516 Neighboring gene uncharacterized LOC105374832 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:83177002-83177502 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:83177503-83178003 Neighboring gene MPRA-validated peak3771 silencer Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:83330702-83331901 Neighboring gene uncharacterized LOC124908050

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A human dihydrofolate reductase intronless pseudogene with an Alu repetitive sequence: multiple DNA insertions at a single chromosomal site. Shimada T, et al. Gene, 1984 Nov. PMID 6526269
  2. Intronless human dihydrofolate reductase genes are derived from processed RNA molecules. Chen MJ, et al. Proc Natl Acad Sci U S A, 1982 Dec. PMID 6961421, Free PMC Article
  3. A human dihydrofolate reductase pseudogene and its relationship to the multiple forms of specific messenger RNA. Masters JN, et al. J Mol Biol, 1983 Jun 15. PMID 6306253
  4. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. Lunetta KL, et al. BMC Med Genet, 2007 Sep 19. PMID 17903295, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Other Names

  • hDHFR-psi 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033423.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC098817, J00146

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    82856803..82857769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    82857006..82857972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_000858.2: Suppressed sequence

    Description
    NG_000858.2: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.

  2. NG_023698.1: Suppressed sequence

    Description
    NG_023698.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
Nucleotide Protein
Heading Accession and Version

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