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Vmn1r32 vomeronasal 1 receptor 32 [ Mus musculus (house mouse) ]

Gene ID: 171188, updated on 8-Feb-2024

Summary

Official Symbol
Vmn1r32provided by MGI
Official Full Name
vomeronasal 1 receptor 32provided by MGI
Primary source
MGI:MGI:2159451
See related
Ensembl:ENSMUSG00000062905 AllianceGenome:MGI:2159451
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rc15
Summary
Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
6 C1; 6 30.57 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (66529167..66536692, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (66552183..66559708, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16154 Neighboring gene STARR-positive B cell enhancer ABC_E8108 Neighboring gene WW domain binding protein 11 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E184 Neighboring gene MAD2 mitotic arrest deficient-like 1 Neighboring gene aurora kinase B pseudogene Neighboring gene STARR-seq mESC enhancer starr_16155 Neighboring gene vomeronasal 1 receptor 33

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Clone Names

  • MGC141379, MGC141380

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables pheromone binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables pheromone receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within response to pheromone ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
vomeronasal 1 receptor 32
Names
vomernasal 1 receptor Vmn1r32
vomeronasal 1 receptor, C15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_134170.3NP_598931.1  vomeronasal 1 receptor 32

    See identical proteins and their annotated locations for NP_598931.1

    Status: PROVISIONAL

    Source sequence(s)
    AK029205
    Consensus CDS
    CCDS20211.1
    UniProtKB/TrEMBL
    Q8R2D9
    Related
    ENSMUSP00000078536.2, ENSMUST00000079584.3
    Conserved Domains (1) summary
    pfam03402
    Location:33293
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    66529167..66536692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)