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Ndufs5-ps NADH:ubiquinone oxidoreductase core subunit S5, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 170658, updated on 8-Feb-2024

Summary

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Official Symbol
Ndufs5-psprovided by MGI
Official Full Name
NADH:ubiquinone oxidoreductase core subunit S5, pseudogeneprovided by MGI
Primary source
MGI:MGI:3612445
See related
AllianceGenome:MGI:3612445
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in central nervous system; dorsal root ganglion; incisor; and vibrissa. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
16 B4; 16 28.44 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (42775943..42776442)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (42955580..42956079)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4932412D23 gene Neighboring gene STARR-seq mESC enhancer starr_40870 Neighboring gene STARR-positive B cell enhancer mm9_chr16:42836127-42836428 Neighboring gene STARR-seq mESC enhancer starr_40871 Neighboring gene STARR-positive B cell enhancer ABC_E52 Neighboring gene predicted gene, 19522 Neighboring gene zinc finger and BTB domain containing 20 Neighboring gene STARR-seq mESC enhancer starr_40874 Neighboring gene STARR-seq mESC enhancer starr_40875 Neighboring gene STARR-seq mESC enhancer starr_40877 Neighboring gene STARR-seq mESC enhancer starr_40878 Neighboring gene predicted gene, 25873 Neighboring gene ribosomal protein L3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, et al. Cell, 2003 Nov 26. PMID 14651853
  2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • NADH dehydrogenase Fe-S protein 5 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002445.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CAAA01140308

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    42775943..42776442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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