Krt31 keratin 31 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Krt31provided by MGI
Official Full Name: keratin 31provided by MGI
Primary source: MGI:MGI:1309993
See related: Ensembl:ENSMUSG00000048981 AllianceGenome:MGI:1309993
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Ha1; Kha1; Krt1-1; MKHA-1
Summary: Predicted to enable structural molecule activity. Predicted to be located in intermediate filament. Is expressed in hair cortex; hair cuticle; hair outer root sheath; and skin. Orthologous to human KRT31 (keratin 31). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 11 D; 11 63.39 cM

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	11	NC_000077.7 (99937472..99941377, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	11	NC_000077.6 (100046646..100050551, complement)

Chromosome 11 - NC_000077.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (2)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

NoName (e-PCR)
- UniSTS:487430

D11Dcr21 (e-PCR), detects polymorphism
- UniSTS:507465

NoName (e-PCR)
- UniSTS:493919

D11Mit123 (e-PCR), detects polymorphism
- UniSTS:126313

D11Mit123.3 (e-PCR), detects polymorphism
- UniSTS:126314

M27734 (e-PCR)
- UniSTS:160159

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables structural molecule activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in epithelial cell differentiation	IBA Inferred from Biological aspect of Ancestor more info
involved_in intermediate filament organization	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoskeleton	IBA Inferred from Biological aspect of Ancestor more info
located_in intermediate filament	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: keratin, type I cuticular Ha1

Names: HKA-1; K31; hair keratin, type I Ha1; keratin complex 1, acidic, gene 1; keratin complex 1, gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.