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KRT19P2 keratin 19 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 160313, updated on 16-Jan-2024

Summary

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Official Symbol
KRT19P2provided by HGNC
Official Full Name
keratin 19 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:33423
See related
Ensembl:ENSG00000293230 AllianceGenome:HGNC:33423
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KRT19P5
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Genomic context

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See KRT19P2 in Genome Data Viewer
Location:
12q22
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (94834454..94835028)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (94815326..94815900)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (95228230..95228804)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain family 3 Neighboring gene uncharacterized LOC105369914 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4728 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:95043785-95044500 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6791 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6792 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6793 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6794 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6795 Neighboring gene uncharacterized LOC124902989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6796 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4731 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6797 Neighboring gene NANOG hESC enhancer GRCh37_chr12:95164297-95164856 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:95209587-95210226 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6799 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6802 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6801 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6800 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:95227575-95228076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:95228077-95228576 Neighboring gene microRNA 492 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6803 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4732 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4733 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4734 Neighboring gene uncharacterized LOC105369915 Neighboring gene NANOG hESC enhancer GRCh37_chr12:95316310-95316850 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4735 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:95353619-95353879 Neighboring gene NANOG hESC enhancer GRCh37_chr12:95383137-95383648 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:95397104-95397731 Neighboring gene NADH:ubiquinone oxidoreductase subunit A12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • keratin 19 pseudogene 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036685.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AB041269, AC117494
    Related
    ENST00000405395.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    94834454..94835028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    94815326..94815900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_002383.2: Suppressed sequence

    Description
    NG_002383.2: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases