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ST13P6 ST13, Hsp70 interacting protein pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 157530, updated on 10-Oct-2023

Summary

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Official Symbol
ST13P6provided by HGNC
Official Full Name
ST13, Hsp70 interacting protein pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:18557
See related
AllianceGenome:HGNC:18557
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM10A6; FAM10A6P
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Genomic context

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Location:
8q24.22
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (133407664..133409525)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (134531528..134533389)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (134419907..134421768)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375771 Neighboring gene uncharacterized LOC105375772 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27994 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27995 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:134420089-134420640 Neighboring gene DPPA3 pseudogene 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:134434961-134435460 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:134461533-134461691 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19563 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:134465210-134465710 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:134465711-134466211 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27996 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:134500724-134501507 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:134502985-134503530 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27997 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28000 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27999 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27998 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:134512049-134512574 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28001 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:134513872-134514372 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19564 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_101228 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28002 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28003 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr8:134544558-134545408 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_101271 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28004 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:134581917-134582770 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19565 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19566 Neighboring gene ST3GAL1 divergent transcript Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_101278 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:134643666-134643864 Neighboring gene small nucleolar RNA SNORA40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of FAM10A4, a member of the ST13 tumor suppressor gene family that maps to the 13q14.3 region associated with B-Cell leukemia, multiple myeloma, and prostate cancer. Sossey-Alaoui K, et al. Genomics, 2002 Jul. PMID 12079276

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • family with sequence similarity 10, member A6
  • suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007353.2 

    Range
    1..1862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    133407664..133409525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    134531528..134533389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_002199.1: Suppressed sequence

    Description
    NR_002199.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is not transcribed.
Nucleotide Protein
Heading Accession and Version

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