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Hpx hemopexin [ Mus musculus (house mouse) ]

Gene ID: 15458, updated on 5-Mar-2024

Summary

Official Symbol
Hpxprovided by MGI
Official Full Name
hemopexinprovided by MGI
Primary source
MGI:MGI:105112
See related
Ensembl:ENSMUSG00000030895 AllianceGenome:MGI:105112
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
hx; Hpxn
Summary
Predicted to enable heme binding activity. Acts upstream of or within several processes, including hemoglobin metabolic process; positive regulation of immune response; and positive regulation of macromolecule metabolic process. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in brain; embryo; liver; liver left lobe; and liver right lobe. Orthologous to human HPX (hemopexin). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver adult (RPKM 1827.7), liver E18 (RPKM 441.7) and 2 other tissues See more
Orthologs
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Genomic context

Location:
7 E3; 7 55.91 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (105240818..105249323, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (105591611..105600116, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4961 Neighboring gene sphingomyelin phosphodiesterase 1, acid lysosomal Neighboring gene amyloid beta precursor protein binding family B member 1 Neighboring gene tripartite motif-containing 3 Neighboring gene STARR-positive B cell enhancer ABC_E9700 Neighboring gene ADP-ribosylation factor interacting protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables heme binding ISO
Inferred from Sequence Orthology
more info
 
enables heme transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in heme metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within heme metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in heme transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within hemoglobin metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of humoral immune response mediated by circulating immunoglobulin IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of immunoglobulin production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of response to type II interferon IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of type II interferon-mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of tyrosine phosphorylation of STAT protein IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of protein metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of type II interferon-mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of tyrosine phosphorylation of STAT protein IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017371.2NP_059067.2  hemopexin precursor

    See identical proteins and their annotated locations for NP_059067.2

    Status: VALIDATED

    Source sequence(s)
    AA985967, AK145928, BY088352
    Consensus CDS
    CCDS21654.1
    UniProtKB/Swiss-Prot
    P97824, Q3UKP2, Q8WUP0, Q91X72
    Related
    ENSMUSP00000033185.9, ENSMUST00000033185.10
    Conserved Domains (1) summary
    cd00094
    Location:47230
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    105240818..105249323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)