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VENTXP4 VENT homeobox pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 152101, updated on 10-Oct-2023

Summary

Official Symbol
VENTXP4provided by HGNC
Official Full Name
VENT homeobox pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:30903
See related
AllianceGenome:HGNC:30903
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
VENTX2P4
Summary
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the Vent homeobox gene family. [provided by RefSeq, Jul 2008]
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Genomic context

See VENTXP4 in Genome Data Viewer
Location:
3p24.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (26346263..26347725, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (26348868..26350330, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (26387754..26389216, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377002 Neighboring gene NANOG hESC enhancer GRCh37_chr3:26199155-26199669 Neighboring gene NANOG hESC enhancer GRCh37_chr3:26202803-26203324 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:26285842-26286342 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:26286343-26286843 Neighboring gene high mobility group box 3 pseudogene 12 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:26350767-26351966 Neighboring gene Sharpr-MPRA regulatory region 9567 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:26431392-26431996 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:26478985-26480184 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:26663597-26664112 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:26665705-26666674 Neighboring gene LRRC3B antisense RNA 1 Neighboring gene leucine rich repeat containing 3B Neighboring gene uncharacterized LOC124909488

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002906.3 

    Range
    101..1563
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    26346263..26347725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    26348868..26350330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)